RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 CLDN18P56856 261 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 B3GALT5-AS1P59052 145 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 EEF1A1P68104 462 aaKnown RBP12.35□□□□□ -0.43
CNOT1-206ENST00000564557 KLHL26Q53HC5 615 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 PDSS1Q5T2R2 415 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 EEF1A1P5Q5VTE0 462 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 PPP4R4Q6NUP7 873 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 MSANTD1Q6ZTZ1 278 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 SEM1Q6ZVN7 128 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 GDF7Q7Z4P5 450 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 RNF130Q86XS8 419 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 ARFGAP2Q8N6H7 521 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 TOR1AIP2Q8NFQ8 470 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 MBD3L2Q8NHZ7 208 aaPredicted RBP12.35□□□□□ -0.43
CNOT1-206ENST00000564557 ROPN1LQ96C74 230 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 ZFP3Q96NJ6 502 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 INPP5KQ9BT40 448 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 PRRG4Q9BZD6 226 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 NMUR2Q9GZQ4 415 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 POLE3Q9NRF9 147 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 MKLN1Q9UL63 735 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 LIPT1Q9Y234 373 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 CARD8Q9Y2G2 431 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 MED12Q93074 2177 aa12.35□□□□□ -0.43
CNOT1-206ENST00000564557 TMEM247A6NEH6 219 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 SERINC4A6NH21 518 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 SLC22A20A6NK97 555 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 B4DXG7 233 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 ZNF264O43296 627 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 EIF4E2O60573 245 aaKnown RBP12.34□□□□□ -0.43
CNOT1-206ENST00000564557 NR2F1P10589 423 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 UBL4AP11441 157 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 UQCRC1P31930 480 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 RNF144AP50876 292 aaPredicted RBP12.34□□□□□ -0.43
CNOT1-206ENST00000564557 SUMO3P55854 103 aaPredicted RBP12.34□□□□□ -0.43
CNOT1-206ENST00000564557 ZNF117Q03924 483 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 CD226Q15762 336 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 TIGD2Q4W5G0 525 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 PDZK1Q5T2W1 519 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 OR2A2Q6IF42 318 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 DNAJC14Q6Y2X3 702 aaPredicted RBP12.34□□□□□ -0.43
CNOT1-206ENST00000564557 EIF3MQ7L2H7 374 aaKnown RBP12.34□□□□□ -0.43
CNOT1-206ENST00000564557 LIX1LQ8IVB5 337 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 GTPBP8Q8N3Z3 284 aaPredicted RBP12.34□□□□□ -0.43
CNOT1-206ENST00000564557 C9orf106Q8NAJ2 232 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 PNPT1Q8TCS8 783 aaKnown RBP12.34□□□□□ -0.43
CNOT1-206ENST00000564557 INTS12Q96CB8 462 aaKnown RBP12.34□□□□□ -0.43
CNOT1-206ENST00000564557 EBF4Q9BQW3 602 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 PINK1Q9BXM7 581 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 ENKD1Q9H0I2 346 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 SERHL2Q9H4I8 314 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 CACYBPQ9HB71 228 aaKnown RBP12.34□□□□□ -0.43
CNOT1-206ENST00000564557 MED17Q9NVC6 651 aa12.34□□□□□ -0.43
CNOT1-206ENST00000564557 KDM4EB2RXH2 506 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-206ENST00000564557 SHISA8B8ZZ34 492 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 EEF1E1-BLOC1S5C9J1V9 151 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 EIF1AYO14602 144 aaKnown RBP12.33□□□□□ -0.44
CNOT1-206ENST00000564557 EEF1E1O43324 174 aaKnown RBP12.33□□□□□ -0.44
CNOT1-206ENST00000564557 FCMRO60667 390 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 TNFRSF21O75509 655 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 RCBTB2O95199 551 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 IL18BPO95998 194 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 CSTAP01040 98 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 NCF2P19878 526 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-206ENST00000564557 PEX19P40855 299 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 CDKN2CP42773 168 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 CRATP43155 626 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 ASCL1P50553 236 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 AGFG1P52594 562 aaKnown RBP12.33□□□□□ -0.44
CNOT1-206ENST00000564557 IRX1P78414 480 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-206ENST00000564557 CBFBQ13951 182 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 GNA13Q14344 377 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 ZNF141Q15928 474 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 PLPPR5Q32ZL2 321 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 HEPHL1Q6MZM0 1159 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 ZNF619Q8N2I2 560 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 NAXEQ8NCW5 288 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 OR9I1Q8NGQ6 314 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 OIT3Q8WWZ8 545 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 VPS33AQ96AX1 596 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 RNF145Q96MT1 663 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 UCN2Q96RP3 112 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 SFXN3Q9BWM7 321 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 ZNF350Q9GZX5 532 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 RABEP2Q9H5N1 569 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 PAQR5Q9NXK6 330 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-206ENST00000564557 FOXD3Q9UJU5 478 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-206ENST00000564557 TRIM33Q9UPN9 1127 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 GPC6Q9Y625 555 aaPredicted RBP12.33□□□□□ -0.44
CNOT1-206ENST00000564557 PCNX3Q9H6A9 2034 aa12.33□□□□□ -0.44
CNOT1-206ENST00000564557 GJE1A6NN92 205 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 NPIPB9F8W1W9 429 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 HMGN4O00479 90 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 UGT2B17O75795 530 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 SYNGR4O95473 234 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 UBTFL6P0CB48 400 aaPredicted RBP12.32□□□□□ -0.44
CNOT1-206ENST00000564557 FCGR2AP12318 317 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 SSTR2P30874 369 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 MAGEA8P43361 318 aa12.32□□□□□ -0.44
CNOT1-206ENST00000564557 EIF1AXP47813 144 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms