RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 UCP2P55851 309 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 GSDMDP57764 484 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 RHOAP61586 193 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 IRX4P78413 519 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 GBE1Q04446 702 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 SLC10A7Q0GE19 358 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 HNRNPDQ14103 355 aaKnown RBP4.24□□□□□ -1.73
LINC00254-201ENST00000563416 ELFN2Q5R3F8 820 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 ADAMTSL4-AS1Q5T5F5 129 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 PRAMEF8Q5VWM4 474 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 TCEAL6Q6IPX3 200 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 FAAP20Q6NZ36 180 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 MFSD7Q6UXD7 560 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 LEKR1Q6ZMV7 388 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 ZNF497Q6ZNH5 498 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 PRSS42Q7Z5A4 293 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 NRARPQ7Z6K4 114 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 KATNAL2Q8IYT4 538 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 TBC1D21Q8IYX1 336 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 LSMEM2Q8N112 164 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 BATF2Q8N1L9 274 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 RYBPQ8N488 228 aaPredicted RBP4.24□□□□□ -1.73
LINC00254-201ENST00000563416 MARVELD2Q8N4S9 558 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 ATPAF2Q8N5M1 289 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 DEFB119Q8N690 84 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 TEX26Q8N6G2 289 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 AMER3Q8N944 861 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 FBXO30Q8TB52 745 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 HPSE2Q8WWQ2 592 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 RAPGEF5Q92565 580 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 N4BP2L2Q92802 583 aaPredicted RBP4.24□□□□□ -1.73
LINC00254-201ENST00000563416 TCEAL3Q969E4 200 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 RAB7BQ96AH8 199 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 AP2M1Q96CW1 435 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 ECHDC3Q96DC8 303 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 PPP1R16AQ96I34 528 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 VPS39Q96JC1 886 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 MAGED4Q96JG8 741 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 LINC00479Q96M42 142 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 OLFM3Q96PB7 478 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 RNF157Q96PX1 679 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 PANX3Q96QZ0 392 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 ATG101Q9BSB4 218 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 EDEM2Q9BV94 578 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 CALN1Q9BXU9 219 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 EGLN1Q9GZT9 426 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 P2RY12Q9H244 342 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 GOLPH3Q9H4A6 298 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 ZDHHC6Q9H6R6 413 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 SDR39U1Q9NRG7 319 aaPredicted RBP4.24□□□□□ -1.73
LINC00254-201ENST00000563416 INTS9Q9NV88 658 aaKnown RBP4.24□□□□□ -1.73
LINC00254-201ENST00000563416 RNF150Q9ULK6 438 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 STRAPQ9Y3F4 350 aaKnown RBP4.24□□□□□ -1.73
LINC00254-201ENST00000563416 HYOU1Q9Y4L1 999 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 FADS3Q9Y5Q0 445 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 ALG6Q9Y672 507 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 SLCO1B1Q9Y6L6 691 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 CLCA3PQ9Y6N3 262 aa4.24□□□□□ -1.73
LINC00254-201ENST00000563416 hCG_1818297A0A087WSY0 165 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 A0A087X002 238 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 A0A1B0GU03 582 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 A0A1W2PPW3 197 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 NEMP2A6NFY4 417 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 ANKRD61A6NGH8 418 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 DFFAO00273 331 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 TRAFD1O14545 582 aaPredicted RBP4.23□□□□□ -1.73
LINC00254-201ENST00000563416 CTDSPLO15194 276 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 SPOPO43791 374 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 SMPD2O60906 423 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 SNRNP200O75643 2136 aaKnown RBP4.23□□□□□ -1.73
LINC00254-201ENST00000563416 PALMO75781 387 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 WDPCPO95876 746 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 UGT2B4P06133 528 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 GNSP15586 552 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 LBPP18428 481 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 CCNCP24863 283 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 MPZP25189 248 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 CTNNA2P26232 953 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 HSPA9P38646 679 aaKnown RBP4.23□□□□□ -1.73
LINC00254-201ENST00000563416 SSR1P43307 286 aaKnown RBP4.23□□□□□ -1.73
LINC00254-201ENST00000563416 MARCKSL1P49006 195 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 DNA2P51530 1060 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 MTCP1P56278 107 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 AP1S1P61966 158 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 CCZ1BP86790 482 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 CCZ1P86791 482 aaPredicted RBP4.23□□□□□ -1.73
LINC00254-201ENST00000563416 FOLH1Q04609 750 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 RAD51Q06609 339 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 PPIDQ08752 370 aaKnown RBP4.23□□□□□ -1.73
LINC00254-201ENST00000563416 TSTA3Q13630 321 aaPredicted RBP4.23□□□□□ -1.73
LINC00254-201ENST00000563416 ZNF235Q14590 738 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 POM121L1PQ3SYA9 428 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 TEX35Q5T0J7 233 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 PWWP2BQ6NUJ5 590 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 HORMAD1Q86X24 394 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 KLHDC8AQ8IYD2 350 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 ARHGAP24Q8N264 748 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 ZNF843Q8N446 348 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 MAPKAPK5-AS1Q8N8E1 139 aa4.23□□□□□ -1.73
LINC00254-201ENST00000563416 CCDC112Q8NEF3 446 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms