RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 MLXQ9UH92 298 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 CDH9Q9ULB4 789 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 RNF6Q9Y252 685 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 MAB21L2Q9Y586 359 aa2.56□□□□□ -2
SHCBP1-202ENST00000563219 DDX49Q9Y6V7 483 aaKnown RBP2.56□□□□□ -2
SHCBP1-202ENST00000563219 IGHV3-16A0A0C4DH30 117 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 CTAGE15A4D2H0 777 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 VSTM2BA6NLU5 285 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 EFCAB7A8K855 629 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 KIF2AO00139 706 aaPredicted RBP2.55□□□□□ -2
SHCBP1-202ENST00000563219 GRIN2DO15399 1336 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 RGS16O15492 202 aaPredicted RBP2.55□□□□□ -2
SHCBP1-202ENST00000563219 PHF1O43189 567 aaPredicted RBP2.55□□□□□ -2
SHCBP1-202ENST00000563219 LCMT2O60294 686 aaKnown RBP2.55□□□□□ -2
SHCBP1-202ENST00000563219 TSC22D2O75157 780 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 ERLIN1O75477 346 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 NOL4O94818 638 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 VENTXO95231 258 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 OPN1LWP04000 364 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 HBQ1P09105 142 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 UQCRFS1P1P0C7P4 283 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 PNMTP11086 282 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 TOP1P11387 765 aaKnown RBP2.55□□□□□ -2
SHCBP1-202ENST00000563219 H2AFXP16104 143 aaPredicted RBP2.55□□□□□ -2
SHCBP1-202ENST00000563219 CAPN2P17655 700 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 GRIA1P42261 906 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 ARHGDIBP52566 201 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 DSCR10P59022 87 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 ACTR3P61158 418 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 BEX3Q00994 111 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 CUL2Q13617 745 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 EXOC3L2Q2M3D2 409 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 CFAP221Q4G0U5 840 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 CYBRD1Q53TN4 286 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 NHLRC3Q5JS37 347 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 SPATA46Q5T0L3 261 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 C19orf35Q6ZS72 473 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 TMUB2Q71RG4 321 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 APTXQ7Z2E3 356 aaKnown RBP2.55□□□□□ -2
SHCBP1-202ENST00000563219 CTAGE6Q86UF2 777 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 NAXDQ8IW45 347 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 FGFRL1Q8N441 504 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 OR4D5Q8NGN0 318 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 OR2L2Q8NH16 312 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 OR1F12Q8NHA8 337 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 EMG1Q92979 244 aaKnown RBP2.55□□□□□ -2
SHCBP1-202ENST00000563219 MS4A14Q96JA4 679 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 RPRD1AQ96P16 312 aaPredicted RBP2.55□□□□□ -2
SHCBP1-202ENST00000563219 CCT8L2Q96SF2 557 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 OMDQ99983 421 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 C19orf43Q9BQ61 176 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 TSSK1BQ9BXA7 367 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 ONECUT1Q9UBC0 465 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 PCSK1NQ9UHG2 260 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 CRLS1Q9UJA2 301 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 RPH3ALQ9UNE2 315 aa2.55□□□□□ -2
SHCBP1-202ENST00000563219 EIF3LQ9Y262 564 aaKnown RBP2.55□□□□□ -2
SHCBP1-202ENST00000563219 TRBV7-9A0A0J9YWB2 115 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 HELTA6NFD8 242 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 SRRM5B3KS81 715 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 SGK1O00141 431 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 BTN3A3O00478 584 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 OR7A17O14581 309 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 MELTFP08582 738 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 FOLR2P14207 255 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 TBXA2RP21731 343 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 IL2RGP31785 369 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 CASP4P49662 377 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 EMDP50402 254 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 HSPA2P54652 639 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 HMGCS2P54868 508 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 RIPK4P57078 832 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 SEC61GP60059 68 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 COX10Q12887 443 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 ZNF154Q13106 437 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 PPP1R3AQ16821 1122 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 SLC5A12Q1EHB4 618 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 C17orf58Q2M2W7 97 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 FILIP1LQ4L180 1135 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 DMRTC1Q5HYR2 192 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 ZNF506Q5JVG8 444 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 LINC00242Q5T6M2 205 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 MEDAGQ5VYS4 303 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 TPGS2Q68CL5 300 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 ATL3Q6DD88 541 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 Q6ZPB1 254 aaPredicted RBP2.54□□□□□ -2
SHCBP1-202ENST00000563219 TAS2R42Q7RTR8 314 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 CEACAM19Q7Z692 300 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 SLC25A42Q86VD7 318 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 UBE2J2Q8N2K1 259 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 ARL14Q8N4G2 192 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 CLDN19Q8N6F1 224 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 SYT14Q8NB59 555 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 OR56B2PQ8NGI1 322 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 FAM110BQ8TC76 370 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 FNDC8Q8TC99 324 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 ADAMTS16Q8TE57 1224 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 ITLN1Q8WWA0 313 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 MAIP1Q8WWC4 291 aa2.54□□□□□ -2
SHCBP1-202ENST00000563219 TOMM40LQ969M1 308 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms