RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 RGNQ15493 299 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 GTDC1Q4AE62 458 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 DCST1Q5T197 706 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 REP15Q6BDI9 236 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 FIGNL1Q6PIW4 674 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 ULK2Q8IYT8 1036 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 METTL25Q8N6Q8 603 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 ZNF527Q8NB42 609 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 TNIP2Q8NFZ5 429 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 SARAFQ96BY9 339 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 ROPN1LQ96C74 230 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 LRRC58Q96CX6 371 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 OTUB1Q96FW1 271 aaPredicted RBP14.23□□□□□ -0.13
USB1-208ENST00000563207 AURKBQ96GD4 344 aaPredicted RBP14.23□□□□□ -0.13
USB1-208ENST00000563207 NODALQ96S42 347 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 OSBPL11Q9BXB4 747 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 KLRF1Q9NZS2 232 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 CALML5Q9NZT1 146 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 P2RX2Q9UBL9 471 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.23□□□□□ -0.13
USB1-208ENST00000563207 KCNE3Q9Y6H6 103 aa14.23□□□□□ -0.13
USB1-208ENST00000563207 C15orf38-AP3S2A0A0A6YYH1 394 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 GNB5O14775 395 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 FADS1O60427 444 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 WDR1O75083 606 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 ICOSLGO75144 302 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 TRAPPC6AO75865 159 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 HPGDP15428 266 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 ATP12AP54707 1039 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 DSTNP60981 165 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 HPCAP84074 193 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 FLYWCH1Q4VC44 716 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 EIPR1Q53HC9 387 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 COX20Q5RI15 118 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.22□□□□□ -0.13
USB1-208ENST00000563207 LRRC74BQ6ZQY2 392 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 TREML1Q86YW5 311 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 MISPQ8IVT2 679 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 PNPT1Q8TCS8 783 aaKnown RBP14.22□□□□□ -0.13
USB1-208ENST00000563207 ZNF597Q96LX8 424 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 TIMP4Q99727 224 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 TBL1XR1Q9BZK7 514 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 ZNF350Q9GZX5 532 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 SAP130Q9H0E3 1048 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 ACKR4Q9NPB9 350 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 QPCTLQ9NXS2 382 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 AP3M1Q9Y2T2 418 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 CCDC168Q8NDH2 2452 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 F8P00451 2351 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 MED12Q93074 2177 aa14.22□□□□□ -0.13
USB1-208ENST00000563207 A0A1W2PQD3 144 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 ALG1L2C9J202 215 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 SCDO00767 359 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 OXSR1O95747 527 aaPredicted RBP14.21□□□□□ -0.13
USB1-208ENST00000563207 NR2F1P10589 423 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 ETFAP13804 333 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 PTGDSP41222 190 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 MASP1P48740 699 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 CASP9P55211 416 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 CRYZQ08257 329 aaKnown RBP14.21□□□□□ -0.13
USB1-208ENST00000563207 C17orf67Q0P5P2 114 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 GRAMD1BQ3KR37 738 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 GPAT3Q53EU6 434 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 WIPI1Q5MNZ9 446 aaPredicted RBP14.21□□□□□ -0.13
USB1-208ENST00000563207 CCNJQ5T5M9 372 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 PRAMEF8Q5VWM4 474 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 PRAMEF7Q5VXH5 474 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 PLXDC2Q6UX71 529 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 HACD2Q6Y1H2 254 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 RELL2Q8NC24 303 aaPredicted RBP14.21□□□□□ -0.13
USB1-208ENST00000563207 OR8J3Q8NGG0 315 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 RAB8BQ92930 207 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 HOPXQ9BPY8 73 aaPredicted RBP14.21□□□□□ -0.13
USB1-208ENST00000563207 CPPED1Q9BRF8 314 aaPredicted RBP14.21□□□□□ -0.13
USB1-208ENST00000563207 THUMPD3Q9BV44 507 aaKnown RBP14.21□□□□□ -0.13
USB1-208ENST00000563207 SPATA9Q9BWV2 254 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 UBQLN3Q9H347 655 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 LIME1Q9H400 295 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 TMEM38AQ9H6F2 299 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 MTHFD2LQ9H903 347 aaPredicted RBP14.21□□□□□ -0.13
USB1-208ENST00000563207 GALNT9Q9HCQ5 603 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 B4GALT7Q9UBV7 327 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 L3MBTL1Q9Y468 752 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 WDR45Q9Y484 360 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 WIF1Q9Y5W5 379 aa14.21□□□□□ -0.13
USB1-208ENST00000563207 H3BNH8 94 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 TNFRSF21O75509 655 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 TFPTP0C1Z6 253 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 MNAT1P51948 309 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 AGFG1P52594 562 aaKnown RBP14.2□□□□□ -0.14
USB1-208ENST00000563207 CRISP3P54108 245 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 GAS1P54826 345 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 MYBPHQ13203 477 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 KRT72Q14CN4 511 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 TIGD3Q6B0B8 471 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 NANOGP8Q6NSW7 305 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 POMZP3Q6PJE2 187 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 ARPINQ7Z6K5 226 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 TMEM200AQ86VY9 491 aa14.2□□□□□ -0.14
USB1-208ENST00000563207 ZZZ3Q8IYH5 903 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms