RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 QPCTLQ9NXS2 382 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 MED11Q9P086 117 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 GMPR2Q9P2T1 348 aaKnown RBP17.15■□□□□ 0.34
RAB40C-207ENST00000563109 PACSIN3Q9UKS6 424 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 CARD8Q9Y2G2 431 aa17.15■□□□□ 0.34
RAB40C-207ENST00000563109 C17orf51A8MQB3 221 aa17.14■□□□□ 0.33
RAB40C-207ENST00000563109 CXCR6O00574 342 aa17.14■□□□□ 0.33
RAB40C-207ENST00000563109 GMFGO60234 142 aa17.14■□□□□ 0.33
RAB40C-207ENST00000563109 NUDT14O95848 222 aa17.14■□□□□ 0.33
RAB40C-207ENST00000563109 TCN1P20061 433 aaPredicted RBP17.14■□□□□ 0.33
RAB40C-207ENST00000563109 MAGEA5P43359 124 aa17.14■□□□□ 0.33
RAB40C-207ENST00000563109 P2RX1P51575 399 aa17.14■□□□□ 0.33
RAB40C-207ENST00000563109 ZNF440Q8IYI8 595 aa17.14■□□□□ 0.33
RAB40C-207ENST00000563109 TOR1AIP2Q8NFQ8 470 aa17.14■□□□□ 0.33
RAB40C-207ENST00000563109 SNRNP40Q96DI7 357 aaKnown RBP17.14■□□□□ 0.33
RAB40C-207ENST00000563109 PINK1Q9BXM7 581 aa17.14■□□□□ 0.33
RAB40C-207ENST00000563109 LAT2Q9GZY6 243 aa17.14■□□□□ 0.33
RAB40C-207ENST00000563109 KLHL28Q9NXS3 571 aa17.14■□□□□ 0.33
RAB40C-207ENST00000563109 FBXL2Q9UKC9 423 aa17.14■□□□□ 0.33
RAB40C-207ENST00000563109 NBEAQ8NFP9 2946 aa17.14■□□□□ 0.33
RAB40C-207ENST00000563109 CLDN24A6NM45 220 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 M0QX08 132 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 TRAPPC6AO75865 159 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 OPN1SWP03999 348 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 RFPL3SP0C7P2 107 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 PGM1P36871 562 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 ZNF41P51814 821 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-207ENST00000563109 DSCR4P56555 118 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-207ENST00000563109 EEF1A1P68104 462 aaKnown RBP17.13■□□□□ 0.33
RAB40C-207ENST00000563109 BNIP2Q12982 314 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 SKP2Q13309 424 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 CBFBQ13951 182 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 NDUFAF6Q330K2 333 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 SOWAHCQ53LP3 525 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-207ENST00000563109 PRR30Q53SZ7 412 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-207ENST00000563109 RNFT1Q5M7Z0 435 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 DHRS4L2Q6PKH6 230 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 FAM71CQ8NEG0 241 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 CPT1CQ8TCG5 803 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 FAR1Q8WVX9 515 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 NR4A3Q92570 626 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 FAM162AQ96A26 154 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 SLC7A6OSQ96CW6 309 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-207ENST00000563109 THTPAQ9BU02 230 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 UBQLN3Q9H347 655 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 EXOSC3Q9NQT5 275 aaKnown RBP17.13■□□□□ 0.33
RAB40C-207ENST00000563109 CD300AQ9UGN4 299 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 EGFL7Q9UHF1 273 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 MAGEL2Q9UJ55 1249 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 NTNG1Q9Y2I2 539 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 HRH3Q9Y5N1 445 aa17.13■□□□□ 0.33
RAB40C-207ENST00000563109 NCKAP5O14513 1909 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 CDHR4A6H8M9 788 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 ANKUB1A6NFN9 424 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 NPIPA5E9PKD4 350 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 DNAJC8O75937 253 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-207ENST00000563109 MFN2O95140 757 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 UQCRBP14927 111 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 GGT1P19440 569 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 DPP4P27487 766 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 SRD5A2P31213 254 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 KDELR2P33947 212 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 GCKP35557 465 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 SLC6A8P48029 635 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 CEACAM7Q14002 265 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 SLC10A1Q14973 349 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 FAM156AQ8NDB6 213 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 OR5W2Q8NH69 310 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 OR14L1PQ8NHC6 308 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 CNOT9Q92600 299 aaKnown RBP17.12■□□□□ 0.33
RAB40C-207ENST00000563109 MCUR1Q96AQ8 359 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 TAMM41Q96BW9 452 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 C1GALT1C1Q96EU7 318 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 RNF145Q96MT1 663 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 TSPAN10Q9H1Z9 355 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-207ENST00000563109 EVA1AQ9H8M9 152 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 ZDHHC11Q9H8X9 412 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 ASF1BQ9NVP2 202 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 ADPRHL2Q9NX46 363 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 DNAJB12Q9NXW2 375 aaKnown RBP17.12■□□□□ 0.33
RAB40C-207ENST00000563109 NPIPA1Q9UND3 350 aa17.12■□□□□ 0.33
RAB40C-207ENST00000563109 TLN1Q9Y490 2541 aaKnown RBP17.12■□□□□ 0.33
RAB40C-207ENST00000563109 A0A087WZY1 265 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 SUV39H1O43463 412 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 OIP5O43482 229 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 CDC40O60508 579 aaKnown RBP eCLIP17.11■□□□□ 0.33
RAB40C-207ENST00000563109 GCM2O75603 506 aaPredicted RBP17.11■□□□□ 0.33
RAB40C-207ENST00000563109 PDE5AO76074 875 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 STAMBPO95630 424 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 PRB1P04280 392 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 PGCP20142 388 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 ME2P23368 584 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 MLLT10P55197 1068 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 DMTNQ08495 405 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 CBLN3Q6UW01 205 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 ZNF550Q7Z398 422 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 PRICKLE2Q7Z3G6 844 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 GRAMD2AQ8IUY3 354 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 SIAH3Q8IW03 269 aa17.11■□□□□ 0.33
RAB40C-207ENST00000563109 SMYD1Q8NB12 490 aa17.11■□□□□ 0.33
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