RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 NKAIN2Q5VXU1 208 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 HSDL2Q6YN16 418 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 TMPRSS11FQ6ZWK6 438 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 LSRQ86X29 649 aaPredicted RBP9.07□□□□□ -0.96
SMG1-205ENST00000561947 PHC2Q8IXK0 858 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 SIX5Q8N196 739 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 CAMKK1Q8N5S9 505 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 OR51Q1Q8NH59 317 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 HS6ST2Q96MM7 605 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 UBQLN3Q9H347 655 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 Q9N2J8 555 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 ATP13A2Q9NQ11 1180 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.07□□□□□ -0.96
SMG1-205ENST00000561947 KLHL3Q9UH77 587 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 ERVK-19Q9WJR5 959 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 RNF215Q9Y6U7 377 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 OR2W5A6NFC9 320 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 NPIPB9F8W1W9 429 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 KPNA4O00629 521 aaPredicted RBP9.07□□□□□ -0.96
SMG1-205ENST00000561947 CHP2O43745 196 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 OCM2P0CE71 109 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 OCMP0CE72 109 aaPredicted RBP9.07□□□□□ -0.96
SMG1-205ENST00000561947 CPEP16870 476 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 BCKDHBP21953 392 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 SOX6P35712 828 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 CRYBB2P43320 205 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 CSNK1EP49674 416 aaKnown RBP9.07□□□□□ -0.96
SMG1-205ENST00000561947 CTBP2P56545 445 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 FXYD6P3P58550 94 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 FGFBP1Q14512 234 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 ZNF141Q15928 474 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 NXNL2Q5VZ03 156 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 RPL13AP3Q6NVV1 102 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 CDK20Q8IZL9 346 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 RCBTB1Q8NDN9 531 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 OR52L1Q8NGH7 329 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 GRHL3Q8TE85 626 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 ARSGQ96EG1 525 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 PELOQ9BRX2 385 aaKnown RBP9.07□□□□□ -0.96
SMG1-205ENST00000561947 TRIM2Q9C040 744 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 OR10A5Q9H207 317 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 ISYNA1Q9NPH2 558 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 FLRT3Q9NZU0 649 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 MED31Q9Y3C7 131 aa9.07□□□□□ -0.96
SMG1-205ENST00000561947 TRIOO75962 3097 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 A0A1B0GWA3 101 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 TAF4O00268 1085 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 WWP2O00308 870 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 CBFA2T3O75081 653 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 SLC2A10O95528 541 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 FUT1P19526 365 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 TBXA2RP21731 343 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 CD1CP29017 333 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 CD40LGP29965 261 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 HTR1FP30939 366 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 GALNSP34059 522 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 ACAA2P42765 397 aaKnown RBP9.06□□□□□ -0.96
SMG1-205ENST00000561947 PGDP52209 483 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 PPP5CP53041 499 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 PSMD4P55036 377 aaKnown RBP9.06□□□□□ -0.96
SMG1-205ENST00000561947 IFITM3Q01628 133 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 SERTAD2Q14140 314 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 ZSWIM7Q19AV6 140 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 OR2G6Q5TZ20 316 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 LIPKQ5VXJ0 399 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 TUBA3EQ6PEY2 450 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 SHFQ7M4L6 423 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 BBS1Q8NFJ9 593 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 C16orf52Q8NHV5 167 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 SLC35B4Q969S0 331 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 BPIFA2Q96DR5 249 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 G6PC3Q9BUM1 346 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 ASPNQ9BXN1 380 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 HINT3Q9NQE9 182 aaKnown RBP9.06□□□□□ -0.96
SMG1-205ENST00000561947 LRIT1Q9P2V4 623 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 CBLCQ9ULV8 474 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 EXOGQ9Y2C4 368 aaKnown RBP9.06□□□□□ -0.96
SMG1-205ENST00000561947 PEX16Q9Y5Y5 336 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 CSNK1G3Q9Y6M4 447 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 TTC36A6NLP5 189 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 BHLHE40O14503 412 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 ADAM11O75078 769 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 RCBTB2O95199 551 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 IFNA16P05015 189 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 LIMS3P0CW19 117 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 LIMS4P0CW20 117 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 CT45A8P0DMV1 189 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 CT45A9P0DMV2 189 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 BMP7P18075 431 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 S100A5P33763 92 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 ATP12AP54707 1039 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 KCNAB1Q14722 419 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 CT45A2Q5DJT8 189 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 PERM1Q5SV97 790 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 CXXC5Q7LFL8 322 aaKnown RBP9.06□□□□□ -0.96
SMG1-205ENST00000561947 ZNF550Q7Z398 422 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 BMP8AQ7Z5Y6 402 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 ZNF615Q8N8J6 731 aa9.06□□□□□ -0.96
SMG1-205ENST00000561947 DNASE2BQ8WZ79 361 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms