RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 SLC8A3P57103 927 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 SRP54P61011 504 aaKnown RBP3.13□□□□□ -1.91
HERC1-215ENST00000561436 ERVK11-1P61568 191 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 BTG1P62324 171 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 KDSRQ06136 332 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 RBBP4Q09028 425 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 IL17AQ16552 155 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 ECSCRQ19T08 205 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 MS4A18Q3C1V0 323 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 MOGAT2Q3SYC2 334 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 FASTKD1Q53R41 847 aaKnown RBP3.13□□□□□ -1.91
HERC1-215ENST00000561436 TOR1AIP1Q5JTV8 583 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 HES3Q5TGS1 186 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 SDHAF4Q5VUM1 108 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 HIST2H2AA3Q6FI13 130 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 CAPN13Q6MZZ7 669 aaPredicted RBP3.13□□□□□ -1.91
HERC1-215ENST00000561436 NEK5Q6P3R8 708 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 GSG1LQ6UXU4 331 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 ZNF730Q6ZMV8 503 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 BBS7Q8IWZ6 715 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 CCDC65Q8IXS2 484 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 ANKRD20A12PQ8NF67 263 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 GPR148Q8TDV2 347 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 SLC13A3Q8WWT9 602 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 FAM131CQ96AQ9 280 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 TMEM159Q96B96 161 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 BIRC7Q96CA5 298 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 DTD2Q96FN9 168 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 LINC00479Q96M42 142 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 NSMCE2Q96MF7 247 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 ANKRD27Q96NW4 1050 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 AGAP3Q96P47 875 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 AGAP4Q96P64 663 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 WWP1Q9H0M0 922 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 ADNPQ9H2P0 1102 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 CYP3A43Q9HB55 503 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 SYTL2Q9HCH5 934 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.13□□□□□ -1.91
HERC1-215ENST00000561436 ERVK-18Q9QC07 812 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 OR1A2Q9Y585 309 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 UBE4BO95155 1302 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 ACACBO00763 2458 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 LAMA4Q16363 1823 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 PLXNA4Q9HCM2 1894 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 CXorf51AA0A1B0GTR3 108 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 MACROD2A1Z1Q3 448 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 MPTX1A8MV57 137 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 NPIPB9F8W1W9 429 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 PRAMEF26H0Y7S4 382 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 TLR4O00206 839 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 NTN3O00634 580 aaPredicted RBP3.12□□□□□ -1.91
HERC1-215ENST00000561436 ALOX15BO15296 676 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 LATO43561 262 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 JAK2O60674 1132 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 SEC22BO75396 215 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 ZNF821O75541 412 aaPredicted RBP3.12□□□□□ -1.91
HERC1-215ENST00000561436 ALPPP05187 535 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 PTMAP06454 111 aaKnown RBP3.12□□□□□ -1.91
HERC1-215ENST00000561436 APRTP07741 180 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 FAM200BP0CF97 657 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 UGT1A4P22310 534 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 AHCYP23526 432 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 MAPK3P27361 379 aaPredicted RBP3.12□□□□□ -1.91
HERC1-215ENST00000561436 CD82P27701 267 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 LUMP51884 338 aaPredicted RBP3.12□□□□□ -1.91
HERC1-215ENST00000561436 HNRNPFP52597 415 aaKnown RBP3.12□□□□□ -1.91
HERC1-215ENST00000561436 RPS14P62263 151 aaKnown RBP3.12□□□□□ -1.91
HERC1-215ENST00000561436 IRX1P78414 480 aaPredicted RBP3.12□□□□□ -1.91
HERC1-215ENST00000561436 SEMG2Q02383 582 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 MFGE8Q08431 387 aaPredicted RBP3.12□□□□□ -1.91
HERC1-215ENST00000561436 GK2Q14410 553 aaPredicted RBP3.12□□□□□ -1.91
HERC1-215ENST00000561436 OR1C1Q15619 314 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 C14orf177Q52M58 125 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 CEP85LQ5SZL2 805 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 NKAIN2Q5VXU1 208 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 RTL6Q6ICC9 239 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 CCDC73Q6ZRK6 1079 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 Q6ZRP5 223 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 TAF8Q7Z7C8 310 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 TRIM69Q86WT6 500 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 ZFAND4Q86XD8 727 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 CACUL1Q86Y37 369 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 ARL14Q8N4G2 192 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 DEFB119Q8N690 84 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 NECAB1Q8N987 351 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 CCNYQ8ND76 341 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 ATXN7L3BQ96GX2 97 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 CXorf58Q96LI9 332 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 FAM218AQ96MZ4 157 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 ERGIC2Q96RQ1 377 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 PKP2Q99959 881 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 NTMT1Q9BV86 223 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 TRIM62Q9BVG3 475 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 FUNDC2Q9BWH2 189 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 STRADBQ9C0K7 418 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 FNDC4Q9H6D8 234 aaPredicted RBP3.12□□□□□ -1.91
HERC1-215ENST00000561436 POLD4Q9HCU8 107 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 PRSS16Q9NQE7 514 aa3.12□□□□□ -1.91
HERC1-215ENST00000561436 STARD5Q9NSY2 213 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms