RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 SLC13A4Q9UKG4 626 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 A4GNTQ9UNA3 340 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 GPR55Q9Y2T6 319 aaPredicted RBP6.94□□□□□ -1.3
TPM1-231ENST00000561395 PCDHGB5Q9Y5G0 923 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 CLCA3PQ9Y6N3 262 aa6.94□□□□□ -1.3
TPM1-231ENST00000561395 NPIPA5A0A0B4J1W7 369 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 TRBV4-1A0A0J9YWV2 114 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 A0A1W2PRQ8 180 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 A1L4Q6 167 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 VSTM2BA6NLU5 285 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 CLDN24A6NM45 220 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 IDSB3KWA1 339 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 NPIPA7E9PJI5 369 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 E9PQ18 207 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 PEX12O00623 359 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 SLC16A6O15403 523 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 FRS3O43559 492 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 MITFO75030 526 aaPredicted RBP6.93□□□□□ -1.3
TPM1-231ENST00000561395 CNOT3O75175 753 aaKnown RBP6.93□□□□□ -1.3
TPM1-231ENST00000561395 CCNB2O95067 398 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 TNFAIP8O95379 198 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 HEXBP07686 556 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 CYC1P08574 325 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 NPIPA8P0DM63 369 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 CCL4P13236 92 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 IL7RP16871 459 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 ZNF28P17035 718 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 CDH2P19022 906 aaPredicted RBP6.93□□□□□ -1.3
TPM1-231ENST00000561395 FUT4P22083 530 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 CBLP22681 906 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 PPICP45877 212 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 CD97P48960 835 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 RGS8P57771 180 aaPredicted RBP6.93□□□□□ -1.3
TPM1-231ENST00000561395 MYBPC1Q00872 1141 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 BLMHQ13867 455 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 DGCR6Q14129 220 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 NNATQ16517 81 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.93□□□□□ -1.3
TPM1-231ENST00000561395 FGD3Q5JSP0 725 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 MRPL2Q5T653 305 aaKnown RBP6.93□□□□□ -1.3
TPM1-231ENST00000561395 TTC23Q5W5X9 447 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 ZNF770Q6IQ21 691 aaPredicted RBP6.93□□□□□ -1.3
TPM1-231ENST00000561395 LCN10Q6JVE6 187 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 KRT80Q6KB66 452 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 FAM198BQ6UWH4 519 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 SHISA6Q6ZSJ9 500 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 ANKRD37Q7Z713 158 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 GALNT5Q7Z7M9 940 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 TSPYL5Q86VY4 417 aaPredicted RBP6.93□□□□□ -1.3
TPM1-231ENST00000561395 OFCC1Q8IZS5 231 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 CLIP4Q8N3C7 705 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 SLC5A8Q8N695 610 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 BCORP1Q8N888 145 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 MORN4Q8NDC4 146 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 ZNF555Q8NEP9 628 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 OR4N2Q8NGD1 307 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 OR9Q2Q8NGE9 314 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 OR1N1Q8NGS0 311 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 DIO2Q92813 273 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 PMEPA1Q969W9 287 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 KIAA1143Q96AT1 154 aaPredicted RBP6.93□□□□□ -1.3
TPM1-231ENST00000561395 LRFN5Q96NI6 719 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 ALPK1Q96QP1 1244 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 G6PC3Q9BUM1 346 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 NUDT9Q9BW91 350 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 GABARAPL3Q9BY60 117 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 OR8D2Q9GZM6 311 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 ZNF696Q9H7X3 374 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 EVA1AQ9H8M9 152 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 PNPLA3Q9NST1 481 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 MAN2C1Q9NTJ4 1040 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 RLIMQ9NVW2 624 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 FAM118AQ9NWS6 357 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 RHCGQ9UBD6 479 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 COPS7AQ9UBW8 275 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 PISDQ9UG56 409 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 KCNE5Q9UJ90 142 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 CBLCQ9ULV8 474 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 ZNF232Q9UNY5 417 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 CFL2Q9Y281 166 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 OR10H1Q9Y4A9 318 aa6.93□□□□□ -1.3
TPM1-231ENST00000561395 EXPH5Q8NEV8 1989 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 ADGRG4Q8IZF6 3080 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 SH3PXD2BA1X283 911 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 CDHR4A6H8M9 788 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 FRG2CA6NGY1 282 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 SAGE2PA6NJ88 616 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 OR6C76A6NM76 312 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 NPIPB9F8W1W9 429 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 MEN1O00255 615 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 FAAHO00519 579 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 BCKDKO14874 412 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 PCDH17O14917 1159 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 TPST2O60704 377 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 ALOX12BO75342 701 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 OXSR1O95747 527 aaPredicted RBP6.92□□□□□ -1.3
TPM1-231ENST00000561395 CLIC3O95833 236 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 FBXO45P0C2W1 286 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 CCNYL3P0C7X3 344 aa6.92□□□□□ -1.3
TPM1-231ENST00000561395 RNF224P0DH78 156 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms