RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 LILRA2Q8N149 483 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 NATD1Q8N6N6 113 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 NUDT8Q8WV74 236 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 OSTF1Q92882 214 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 COQ8BQ96D53 544 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 HS3ST6Q96QI5 342 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 C1orf50Q9BV19 199 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 ACTRT3Q9BYD9 372 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 ROPN1BQ9BZX4 212 aaPredicted RBP14.51□□□□□ -0.09
SNX1-213ENST00000561026 TMEM185BQ9H7F4 350 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 ROPN1Q9HAT0 212 aaPredicted RBP14.51□□□□□ -0.09
SNX1-213ENST00000561026 ATAD3AQ9NVI7 634 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 ZDHHC2Q9UIJ5 367 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 ROS1P08922 2347 aa14.51□□□□□ -0.09
SNX1-213ENST00000561026 UQCRHLA0A096LP55 91 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 SMPD2O60906 423 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 SOX30O94993 753 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 PPP3CBP16298 524 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 ATP6V1C1P21283 382 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 FPR1P21462 350 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 LOXP28300 417 aaPredicted RBP14.5□□□□□ -0.09
SNX1-213ENST00000561026 CARD18P57730 90 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 VSNL1P62760 191 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 ZNF117Q03924 483 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 IFFO1Q0D2I5 559 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 LSM12Q3MHD2 195 aaKnown RBP14.5□□□□□ -0.09
SNX1-213ENST00000561026 PDSS1Q5T2R2 415 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 STAC2Q6ZMT1 411 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 LRRC75A-AS1Q8N1F1 130 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 KRTCAP2Q8N6L1 136 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 FNDC5Q8NAU1 212 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 ZNF527Q8NB42 609 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 OR56A1Q8NGH5 318 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 PHOSPHO1Q8TCT1 267 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 ADAMTS15Q8TE58 950 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 KLHL15Q96M94 604 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 PRPF18Q99633 342 aaKnown RBP14.5□□□□□ -0.09
SNX1-213ENST00000561026 HOXD1Q9GZZ0 328 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 CXorf36Q9H7Y0 433 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 UBTD1Q9HAC8 227 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 GPATCH2Q9NW75 528 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 ICAM5Q9UMF0 924 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 FAF1Q9UNN5 650 aaPredicted RBP14.5□□□□□ -0.09
SNX1-213ENST00000561026 KCNE3Q9Y6H6 103 aa14.5□□□□□ -0.09
SNX1-213ENST00000561026 EFNA2O43921 213 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 C6orf47O95873 294 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 THBDP07204 575 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 KRT16P08779 473 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 INHBBP09529 407 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 CREB1P16220 341 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 PRPS1L1P21108 318 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 TP53BP2Q13625 1128 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 SPDYE7PQ495Y7 208 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 DCST2Q5T1A1 773 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 GTF2IRD2BQ6EKJ0 949 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 CBLN3Q6UW01 205 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 GTF2IRD2Q86UP8 949 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 P3H2Q8IVL5 708 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 RIMKLAQ8IXN7 391 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 SMR3AQ99954 134 aa14.49□□□□□ -0.09
SNX1-213ENST00000561026 NPIPA5A0A0B4J1W7 369 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 NPIPA7E9PJI5 369 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 NPIPB9F8W1W9 429 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 H3BNH8 94 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 KLF4O43474 513 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 OIP5O43482 229 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 SKAP2O75563 359 aaPredicted RBP14.48□□□□□ -0.09
SNX1-213ENST00000561026 BPGMP07738 259 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 NPIPA8P0DM63 369 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 NID1P14543 1247 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 ELK4P28324 431 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 ADH6P28332 368 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 SHC1P29353 583 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 ADSLP30566 484 aaPredicted RBP14.48□□□□□ -0.09
SNX1-213ENST00000561026 SFTPDP35247 375 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 P2RX1P51575 399 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 ATP12AP54707 1039 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 SUMO3P55854 103 aaPredicted RBP14.48□□□□□ -0.09
SNX1-213ENST00000561026 FOXF1Q12946 379 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 Q5PR19 223 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.48□□□□□ -0.09
SNX1-213ENST00000561026 C20orf204Q6ZNR8 217 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 BEND4Q6ZU67 534 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 STK32CQ86UX6 486 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 SFXN5Q8TD22 340 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 MOAP1Q96BY2 351 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 TUBGCP3Q96CW5 907 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 CCL19Q99731 98 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 BHLHE41Q9C0J9 482 aaPredicted RBP14.48□□□□□ -0.09
SNX1-213ENST00000561026 FANCFQ9NPI8 374 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 TIGARQ9NQ88 270 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 CARD8Q9Y2G2 431 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 ACTL7BQ9Y614 415 aa14.48□□□□□ -0.09
SNX1-213ENST00000561026 NUP214P35658 2090 aaPredicted RBP14.48□□□□□ -0.09
SNX1-213ENST00000561026 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 GTPBP1O00178 669 aaKnown RBP14.47□□□□□ -0.09
SNX1-213ENST00000561026 ZNF195O14628 629 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 CFLARO15519 480 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 TYROBPO43914 113 aa14.47□□□□□ -0.09
SNX1-213ENST00000561026 NUDT14O95848 222 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms