RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 KHDRBS2Q5VWX1 349 aaKnown RBP15.36■□□□□ 0.05
TPM1-228ENST00000560975 CMIPQ8IY22 773 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 LILRB1Q8NHL6 650 aaPredicted RBP15.36■□□□□ 0.05
TPM1-228ENST00000560975 ARL6Q9H0F7 186 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 NANSQ9NR45 359 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 HPF1Q9NWY4 346 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 PRKAG2Q9UGJ0 569 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 ATPIF1Q9UII2 106 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 FAM74A7A6NL05 159 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 J3QRE1 110 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 SUSD5O60279 629 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 ERAL1O75616 437 aaKnown RBP15.36■□□□□ 0.05
TPM1-228ENST00000560975 POP4O95707 220 aaKnown RBP15.36■□□□□ 0.05
TPM1-228ENST00000560975 PTHLHP12272 177 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 CKBP12277 381 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 PRLHRP49683 370 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 NCBP2P52298 156 aaKnown RBP eCLIP15.36■□□□□ 0.05
TPM1-228ENST00000560975 B2MP61769 119 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 TMEM44Q2T9K0 475 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 FAM74A3Q4VXF1 159 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 METTL11BQ5VVY1 283 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 ZNF620Q6ZNG0 422 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 TPRA1Q86W33 373 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 TRAPPC5Q8IUR0 188 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 NPDC1Q9NQX5 325 aaPredicted RBP15.36■□□□□ 0.05
TPM1-228ENST00000560975 IL20Q9NYY1 176 aa15.36■□□□□ 0.05
TPM1-228ENST00000560975 FXYD6-FXYD2A0A087WZ82 144 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 CARNS1A5YM72 827 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 RP2O75695 350 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 TGM6O95932 706 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 MT-ND5P03915 603 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 FGF2P09038 288 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 ST3GAL3Q11203 375 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 GNA13Q14344 377 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 PRAMEF14Q5SWL7 426 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 PRAMEF13Q5VWM6 474 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 SEZ6L2Q6UXD5 910 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 APOOLQ6UXV4 268 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 GDPD4Q6W3E5 623 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 TMEM150AQ86TG1 271 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 LGALS14Q8TCE9 139 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 HAVCR2Q8TDQ0 301 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 GLYATL1Q969I3 302 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 AHCYL2Q96HN2 611 aaKnown RBP15.35■□□□□ 0.05
TPM1-228ENST00000560975 C7orf50Q9BRJ6 194 aaKnown RBP15.35■□□□□ 0.05
TPM1-228ENST00000560975 NDC1Q9BTX1 674 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 FXYD6Q9H0Q3 95 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 MTG2Q9H4K7 406 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 FGBP02675 491 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 HMGN2P05204 90 aaKnown RBP15.35■□□□□ 0.05
TPM1-228ENST00000560975 GALTP07902 379 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 PYCR1P32322 319 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 STAT5AP42229 794 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 BDH1Q02338 343 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 HENMT1Q5T8I9 393 aaKnown RBP15.35■□□□□ 0.05
TPM1-228ENST00000560975 ANKRD53Q8N9V6 530 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 OR52B4Q8NGK2 314 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 OR52I2Q8NH67 350 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 SUN3Q8TAQ9 357 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 SCARB1Q8WTV0 552 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 SMIM4Q8WVI0 70 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 DIO2Q92813 273 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 GHSRQ92847 366 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 ORAI1Q96D31 301 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 UBQLN3Q9H347 655 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 NOX3Q9HBY0 568 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 KLK11Q9UBX7 282 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 GMEB2Q9UKD1 530 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 CAMK2AQ9UQM7 478 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 ENTPD4Q9Y227 616 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 YIPF1Q9Y548 306 aa15.35■□□□□ 0.05
TPM1-228ENST00000560975 DNASE2O00115 360 aaPredicted RBP15.34■□□□□ 0.05
TPM1-228ENST00000560975 KHDRBS3O75525 346 aaKnown RBP15.34■□□□□ 0.05
TPM1-228ENST00000560975 NDUFV2P19404 249 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 RAB3AP20336 220 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 S100A11P31949 105 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 DYRK1AQ13627 763 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 NIPAL3Q6P499 406 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 Q6ZNB5 142 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 TMUB2Q71RG4 321 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 MEPCEQ7L2J0 689 aaKnown RBP15.34■□□□□ 0.05
TPM1-228ENST00000560975 TRAM1L1Q8N609 369 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 OR5J2Q8NH18 312 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 UBE2E3Q969T4 207 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 ZCCHC2Q9C0B9 1178 aaKnown RBP15.34■□□□□ 0.05
TPM1-228ENST00000560975 ENKD1Q9H0I2 346 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 SLC6A15Q9H2J7 730 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 ELAC1Q9H777 363 aaKnown RBP15.34■□□□□ 0.05
TPM1-228ENST00000560975 ZMIZ1Q9ULJ6 1067 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 CA5BQ9Y2D0 317 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 AIPO00170 330 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 CKMP06732 381 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 C8orf89P0DMQ9 161 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 CTSAP10619 480 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 EPXP11678 715 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 FPR3P25089 353 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 KHKP50053 298 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 EPHA4P54764 986 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 CMTM4Q8IZR5 234 aa15.34■□□□□ 0.05
TPM1-228ENST00000560975 RELL2Q8NC24 303 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms