RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 THOC1Q96FV9 657 aaKnown RBP8.79□□□□□ -1
TPM1-225ENST00000560679 FRG2BQ96QU4 278 aa8.79□□□□□ -1
TPM1-225ENST00000560679 MYLK2Q9H1R3 596 aa8.79□□□□□ -1
TPM1-225ENST00000560679 IPPKQ9H8X2 491 aa8.79□□□□□ -1
TPM1-225ENST00000560679 EML4Q9HC35 981 aaKnown RBP8.79□□□□□ -1
TPM1-225ENST00000560679 FANCFQ9NPI8 374 aa8.79□□□□□ -1
TPM1-225ENST00000560679 GLRX2Q9NS18 164 aa8.79□□□□□ -1
TPM1-225ENST00000560679 FBXO34Q9NWN3 711 aa8.79□□□□□ -1
TPM1-225ENST00000560679 DCDC2Q9UHG0 476 aa8.79□□□□□ -1
TPM1-225ENST00000560679 EMCNQ9ULC0 261 aa8.79□□□□□ -1
TPM1-225ENST00000560679 MCTS1Q9ULC4 181 aaKnown RBP8.79□□□□□ -1
TPM1-225ENST00000560679 ACOT9Q9Y305 439 aa8.79□□□□□ -1
TPM1-225ENST00000560679 TNFSF11O14788 317 aa8.78□□□□□ -1
TPM1-225ENST00000560679 ADAMDEC1O15204 470 aa8.78□□□□□ -1
TPM1-225ENST00000560679 GMFGO60234 142 aa8.78□□□□□ -1
TPM1-225ENST00000560679 CLDN9O95484 217 aa8.78□□□□□ -1
TPM1-225ENST00000560679 OPN1LWP04000 364 aa8.78□□□□□ -1
TPM1-225ENST00000560679 PROCP04070 461 aa8.78□□□□□ -1
TPM1-225ENST00000560679 LTA4HP09960 611 aaKnown RBP8.78□□□□□ -1
TPM1-225ENST00000560679 GFAPP14136 432 aa8.78□□□□□ -1
TPM1-225ENST00000560679 ZNF17P17021 662 aa8.78□□□□□ -1
TPM1-225ENST00000560679 PSMA4P25789 261 aaKnown RBP8.78□□□□□ -1
TPM1-225ENST00000560679 TYK2P29597 1187 aa8.78□□□□□ -1
TPM1-225ENST00000560679 ALDH9A1P49189 494 aa8.78□□□□□ -1
TPM1-225ENST00000560679 DSCR9P59020 149 aa8.78□□□□□ -1
TPM1-225ENST00000560679 PSPHP78330 225 aa8.78□□□□□ -1
TPM1-225ENST00000560679 MRPS22P82650 360 aaKnown RBP8.78□□□□□ -1
TPM1-225ENST00000560679 SPOCK1Q08629 439 aa8.78□□□□□ -1
TPM1-225ENST00000560679 BST1Q10588 318 aa8.78□□□□□ -1
TPM1-225ENST00000560679 ZNF155Q12901 538 aaPredicted RBP8.78□□□□□ -1
TPM1-225ENST00000560679 ILF2Q12905 390 aaKnown RBP8.78□□□□□ -1
TPM1-225ENST00000560679 TRAF3Q13114 568 aa8.78□□□□□ -1
TPM1-225ENST00000560679 CHI3L2Q15782 390 aa8.78□□□□□ -1
TPM1-225ENST00000560679 ZNF239Q16600 458 aaKnown RBP8.78□□□□□ -1
TPM1-225ENST00000560679 APOOLQ6UXV4 268 aa8.78□□□□□ -1
TPM1-225ENST00000560679 MARCH3Q86UD3 253 aa8.78□□□□□ -1
TPM1-225ENST00000560679 CCDC116Q8IYX3 515 aa8.78□□□□□ -1
TPM1-225ENST00000560679 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.78□□□□□ -1
TPM1-225ENST00000560679 OR2V1Q8NHB1 315 aa8.78□□□□□ -1
TPM1-225ENST00000560679 RFWD2Q8NHY2 731 aa8.78□□□□□ -1
TPM1-225ENST00000560679 RNF128Q8TEB7 428 aa8.78□□□□□ -1
TPM1-225ENST00000560679 TRPC4APQ8TEL6 797 aa8.78□□□□□ -1
TPM1-225ENST00000560679 DUSP19Q8WTR2 217 aa8.78□□□□□ -1
TPM1-225ENST00000560679 ABHD3Q8WU67 409 aa8.78□□□□□ -1
TPM1-225ENST00000560679 KCTD4Q8WVF5 259 aa8.78□□□□□ -1
TPM1-225ENST00000560679 HSD17B8Q92506 261 aa8.78□□□□□ -1
TPM1-225ENST00000560679 FAM168AQ92567 244 aa8.78□□□□□ -1
TPM1-225ENST00000560679 NXNL1Q96CM4 212 aa8.78□□□□□ -1
TPM1-225ENST00000560679 MSI2Q96DH6 328 aaKnown RBP8.78□□□□□ -1
TPM1-225ENST00000560679 ERP27Q96DN0 273 aa8.78□□□□□ -1
TPM1-225ENST00000560679 ADAD1Q96M93 576 aaKnown RBP8.78□□□□□ -1
TPM1-225ENST00000560679 KLHDC3Q9BQ90 382 aa8.78□□□□□ -1
TPM1-225ENST00000560679 MECRQ9BV79 373 aa8.78□□□□□ -1
TPM1-225ENST00000560679 TMEM185BQ9H7F4 350 aa8.78□□□□□ -1
TPM1-225ENST00000560679 PTGES2Q9H7Z7 377 aa8.78□□□□□ -1
TPM1-225ENST00000560679 NMRAL1Q9HBL8 299 aa8.78□□□□□ -1
TPM1-225ENST00000560679 NGBQ9NPG2 151 aa8.78□□□□□ -1
TPM1-225ENST00000560679 FARSBQ9NSD9 589 aaKnown RBP8.78□□□□□ -1
TPM1-225ENST00000560679 FAIMQ9NVQ4 179 aa8.78□□□□□ -1
TPM1-225ENST00000560679 FAM120CQ9NX05 1096 aaKnown RBP8.78□□□□□ -1
TPM1-225ENST00000560679 UTS2RQ9UKP6 389 aa8.78□□□□□ -1
TPM1-225ENST00000560679 KCNS2Q9ULS6 477 aa8.78□□□□□ -1
TPM1-225ENST00000560679 VDAC3Q9Y277 283 aa8.78□□□□□ -1
TPM1-225ENST00000560679 SNX8Q9Y5X2 465 aa8.78□□□□□ -1
TPM1-225ENST00000560679 A0A0J9YW62 118 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 GOLGA8QA0A0J9YX86 632 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 GOLGA8OA6NCC3 632 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 ZNF814B7Z6K7 855 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 E7EQL1 145 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 GOLGA8NF8WBI6 632 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 ABCD4O14678 606 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 DLX3O60479 287 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 PLOD3O60568 738 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 SNNO75324 88 aaPredicted RBP8.77□□□□□ -1.01
TPM1-225ENST00000560679 BCAS2O75934 225 aaPredicted RBP8.77□□□□□ -1.01
TPM1-225ENST00000560679 ATP5HO75947 161 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 LY6HO94772 140 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 SYNGR4O95473 234 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 ADAP00813 363 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 SERPINE1P05121 402 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 COL6A2P12110 1019 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 ITGA2P17301 1181 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 USF1P22415 310 aaPredicted RBP8.77□□□□□ -1.01
TPM1-225ENST00000560679 SHC1P29353 583 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 GZMKP49863 264 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 ARFIP2P53365 341 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 ALDH18A1P54886 795 aaKnown RBP8.77□□□□□ -1.01
TPM1-225ENST00000560679 LSM11P83369 360 aaKnown RBP eCLIP8.77□□□□□ -1.01
TPM1-225ENST00000560679 STX3Q13277 289 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 CCDC153Q494R4 210 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 AGAP6Q5VW22 663 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 FAM166AQ6J272 317 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 B3GLCTQ6Y288 498 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 RAPH1Q70E73 1250 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 TBC1D1Q86TI0 1168 aaPredicted RBP8.77□□□□□ -1.01
TPM1-225ENST00000560679 GTPBP8Q8N3Z3 284 aaPredicted RBP8.77□□□□□ -1.01
TPM1-225ENST00000560679 RHEBL1Q8TAI7 183 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 PROX1Q92786 737 aa8.77□□□□□ -1.01
TPM1-225ENST00000560679 KISS1RQ969F8 398 aaPredicted RBP8.77□□□□□ -1.01
TPM1-225ENST00000560679 NSUN5Q96P11 429 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms