RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 NPPAP01160 153 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 STSP08842 583 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 MSX1P28360 303 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 PGM1P36871 562 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 CA7P43166 264 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 CPA2P48052 419 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 NUDT2P50583 147 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 CCR4P51679 360 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 B3GALT5-AS1P59052 145 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 KCNC4Q03721 635 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 CRYZQ08257 329 aaKnown RBP14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 SKP2Q13309 424 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 SCARB2Q14108 478 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 GNA13Q14344 377 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 EMC4Q5J8M3 183 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 RAET1LQ5VY80 246 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 C3P1Q6ZMU1 363 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 ZNF836Q6ZNA1 936 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 EIF3MQ7L2H7 374 aaKnown RBP14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 VRK2Q86Y07 508 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 DOLPP1Q86YN1 238 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 CCDC197Q8NCU1 140 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 OR8J3Q8NGG0 315 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 OR52P1PQ8NH57 321 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 BBS10Q8TAM1 723 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 SARAFQ96BY9 339 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 CMTM5Q96DZ9 223 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 SFXN2Q96NB2 322 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 NPAS1Q99742 590 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 TMEM38AQ9H6F2 299 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 BCL2L10Q9HD36 194 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 PNPLA3Q9NST1 481 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 SUCOQ9UBS9 1254 aaKnown RBP14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 ACAD8Q9UKU7 415 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 ICAM5Q9UMF0 924 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 MRPS18CQ9Y3D5 142 aaKnown RBP14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 POLEQ07864 2286 aa14.06□□□□□ -0.16
LYSMD2-204ENST00000560491 GCN1Q92616 2671 aaKnown RBP14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 A0A0G2JPF8 293 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 HNRNPCL2B2RXH8 293 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 HNRNPCL3B7ZW38 293 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 NDUFAB1O14561 156 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 PRRG2O14669 202 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 LRRTM2O43300 516 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 HNRNPCL1O60812 293 aaKnown RBP14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 SEMA7AO75326 666 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 PGM3O95394 542 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 NUDT14O95848 222 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 DBIP07108 87 aaKnown RBP14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 HNRNPCL4P0DMR1 293 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 IL7RP16871 459 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 BMP7P18075 431 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 SLC6A2P23975 617 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 AQP1P29972 269 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 PRDX6P30041 224 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 ADH7P40394 386 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 GZMMP51124 257 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 P2RX1P51575 399 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 GFRA1P56159 465 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 KCNJ10P78508 379 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 SRSF1Q07955 248 aaKnown RBP eCLIP14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 TOMM34Q15785 309 aaPredicted RBP14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 PLPPR5Q32ZL2 321 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 NHSL2Q5HYW2 709 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 NET1Q7Z628 596 aaPredicted RBP14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 FJX1Q86VR8 437 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 PEX5LQ8IYB4 626 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 ZZZ3Q8IYH5 903 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 FAM71CQ8NEG0 241 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 OIT3Q8WWZ8 545 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 CNOT9Q92600 299 aaKnown RBP14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 ABTB1Q969K4 478 aaPredicted RBP14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 ZNF524Q96C55 264 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 DTNBP1Q96EV8 351 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 TIMP4Q99727 224 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 LAT2Q9GZY6 243 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 EFCAB1Q9HAE3 211 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 HHATLQ9HCP6 504 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 MED17Q9NVC6 651 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 ARL8BQ9NVJ2 186 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 USP22Q9UPT9 525 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 ZNF443Q9Y2A4 671 aaPredicted RBP14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 SLC35A3Q9Y2D2 325 aa14.05□□□□□ -0.16
LYSMD2-204ENST00000560491 HIVEP3Q5T1R4 2406 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 OR2M5A3KFT3 312 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 CCT8L1PA6NM43 557 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 BCKDKO14874 412 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 EIF4E2O60573 245 aaKnown RBP14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 NID1P14543 1247 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 STARP49675 285 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 ZNF41P51814 821 aaPredicted RBP14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 CASP6P55212 293 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 ART3Q13508 389 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 GXYLT1Q4G148 440 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 C4orf17Q53FE4 359 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 MRPL2Q5T653 305 aaKnown RBP14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 PRAMEF8Q5VWM4 474 aa14.04□□□□□ -0.16
LYSMD2-204ENST00000560491 PRAMEF7Q5VXH5 474 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms