RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 EEF1E1O43324 174 aaKnown RBP12.65□□□□□ -0.38
TRAF3-208ENST00000560371 CNOT4O95628 575 aaKnown RBP12.65□□□□□ -0.38
TRAF3-208ENST00000560371 OPN1LWP04000 364 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 NPIPA8P0DM63 369 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 PRDX3P30048 256 aaKnown RBP12.65□□□□□ -0.38
TRAF3-208ENST00000560371 LCN1P31025 176 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 FOXA1P55317 472 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 FCRLBQ6BAA4 426 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 SPAG16Q8N0X2 631 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 ARFGAP1Q8N6T3 406 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 FAM46BQ96A09 425 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 CBLCQ9ULV8 474 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 PCDHB10Q9UN67 800 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 SLC6A14Q9UN76 642 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 UBE2J1Q9Y385 318 aaPredicted RBP12.65□□□□□ -0.38
TRAF3-208ENST00000560371 PRSS21Q9Y6M0 314 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 H3BNC9 293 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 FRS3O43559 492 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 TCN2P20062 427 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 ART1P52961 327 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 RAB12Q6IQ22 244 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 OR9Q2Q8NGE9 314 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 OR1J4Q8NGS1 313 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 FAM86C1Q9NVL1 165 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 RABL2AQ9UBK7 228 aaPredicted RBP12.65□□□□□ -0.38
TRAF3-208ENST00000560371 RABL2BQ9UNT1 228 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 IER3IP1Q9Y5U9 82 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 LRRTM2O43300 516 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 CD97P48960 835 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 AADACL4Q5VUY2 407 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 DNAJB5O75953 348 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 CPMP14384 443 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 PARM1Q6UWI2 310 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 ZNF704Q6ZNC4 412 aaPredicted RBP12.65□□□□□ -0.38
TRAF3-208ENST00000560371 TREM1Q9NP99 234 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 ADAMTS6Q9UKP5 1117 aa12.65□□□□□ -0.38
TRAF3-208ENST00000560371 SLC2A5P22732 501 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 AKR1C2P52895 323 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 PIGFQ07326 219 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 VEZF1Q14119 521 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 MICAQ29983 383 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 PKDCCQ504Y2 493 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 OR14A16Q8NHC5 309 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 TBC1D15Q8TC07 691 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 TRUB1Q8WWH5 349 aaKnown RBP12.64□□□□□ -0.39
TRAF3-208ENST00000560371 ELSPBP1Q96BH3 223 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 SGCZQ96LD1 299 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 ASB16Q96NS5 453 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 CUEDC1Q9NWM3 386 aaPredicted RBP12.64□□□□□ -0.39
TRAF3-208ENST00000560371 STUB1Q9UNE7 303 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 MPPED1O15442 326 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 GALR3O60755 368 aaPredicted RBP12.64□□□□□ -0.39
TRAF3-208ENST00000560371 KCNK5O95279 499 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 UGT2B7P16662 529 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 TMEM236Q5W0B7 351 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 LANCL3Q6ZV70 420 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 LSM14AQ8ND56 463 aaKnown RBP12.64□□□□□ -0.39
TRAF3-208ENST00000560371 INSM2Q96T92 566 aaPredicted RBP12.64□□□□□ -0.39
TRAF3-208ENST00000560371 FGF21Q9NSA1 209 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 DOCK1Q14185 1865 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 ANKRD30BLA7E2S9 258 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 NME4O00746 187 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 KLKB1P03952 638 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 CPOXP36551 454 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 UGT2A3Q6UWM9 527 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 SERPINA11Q86U17 422 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 LGALS12Q96DT0 336 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 OR10A5Q9H207 317 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 OR10A2Q9H208 303 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 SEMA6CQ9H3T2 930 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 UBE2ZQ9H832 354 aaPredicted RBP12.64□□□□□ -0.39
TRAF3-208ENST00000560371 CSNK1G3Q9Y6M4 447 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 CKAP5Q14008 2032 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 ATG12O94817 140 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 PBX4Q9BYU1 374 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 ABLIM3O94929 683 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 RPS17P08708 135 aaKnown RBP12.64□□□□□ -0.39
TRAF3-208ENST00000560371 PITPNBP48739 271 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 TMEM151AQ8N4L1 468 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 DTX3Q8N9I9 347 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 ZMYND19Q96E35 227 aaPredicted RBP12.64□□□□□ -0.39
TRAF3-208ENST00000560371 LMF1Q96S06 567 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 TAS2R8Q9NYW2 309 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 HSPE1-MOB4S4R3N1 261 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 ISPDA4D126 451 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 ZNF182P17025 639 aaPredicted RBP12.64□□□□□ -0.39
TRAF3-208ENST00000560371 CAPN3P20807 821 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 IRS1P35568 1242 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 MAGEA3P43357 314 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 EIF2B1Q14232 305 aaKnown RBP12.64□□□□□ -0.39
TRAF3-208ENST00000560371 CTSL3PQ5NE16 218 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 WBP2NLQ6ICG8 309 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 BAIAP2L2Q6UXY1 529 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 PRR18Q8N4B5 295 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 SMIM14Q96QK8 99 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 TMEM45AQ9NWC5 275 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 ATPIF1Q9UII2 106 aa12.64□□□□□ -0.39
TRAF3-208ENST00000560371 WDPCPO95876 746 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 MAP4K2Q12851 820 aa12.63□□□□□ -0.39
TRAF3-208ENST00000560371 SNTB2Q13425 540 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms