RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 BCAS1O75363 584 aaPredicted RBP15.88■□□□□ 0.13
HDDC3-205ENST00000559898 CRHP06850 196 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 ZNF17P17021 662 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 KLK2P20151 261 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 PRPS1L1P21108 318 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 LOXP28300 417 aaPredicted RBP15.88■□□□□ 0.13
HDDC3-205ENST00000559898 SFTPDP35247 375 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 SLC1A6P48664 564 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 NME5P56597 212 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 EXOC3L2Q2M3D2 409 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 OR2A2Q6IF42 318 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 HMGN2P46Q86SG4 172 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 OR56A1Q8NGH5 318 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 ADAMTS15Q8TE58 950 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 DTNBP1Q96EV8 351 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 ZC3HAV1LQ96H79 300 aaKnown RBP15.88■□□□□ 0.13
HDDC3-205ENST00000559898 TEX37Q96LM6 180 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 HS3ST6Q96QI5 342 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 NUF2Q9BZD4 464 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 ICAM5Q9UMF0 924 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 EIF3LQ9Y262 564 aaKnown RBP15.88■□□□□ 0.13
HDDC3-205ENST00000559898 ZFHX3Q15911 3703 aa15.88■□□□□ 0.13
HDDC3-205ENST00000559898 ESPNB1AK53 854 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 LINC01387J3KSC0 135 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 NID1P14543 1247 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 POU2F1P14859 743 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 DNASE1P24855 282 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 UGT2B10P36537 528 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 RPL3P39023 403 aaKnown RBP15.87■□□□□ 0.13
HDDC3-205ENST00000559898 WDR4P57081 412 aaKnown RBP15.87■□□□□ 0.13
HDDC3-205ENST00000559898 EEFSECP57772 596 aaKnown RBP15.87■□□□□ 0.13
HDDC3-205ENST00000559898 C21orf58P58505 322 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 RPS3AP61247 264 aaKnown RBP15.87■□□□□ 0.13
HDDC3-205ENST00000559898 FOXD4Q12950 439 aaPredicted RBP15.87■□□□□ 0.13
HDDC3-205ENST00000559898 C6orf120Q7Z4R8 191 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 CAMKMTQ7Z624 323 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 TGIF2LYQ8IUE0 185 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 KRTAP1-3Q8IUG1 177 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 OR2V1Q8NHB1 315 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 RFWD2Q8NHY2 731 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 FBXO27Q8NI29 283 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 SFXN5Q8TD22 340 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 MARK4Q96L34 752 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 SDF2Q99470 211 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 KCNK9Q9NPC2 374 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 ATAD3AQ9NVI7 634 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 ASIC5Q9NY37 505 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 NOP53Q9NZM5 478 aaKnown RBP15.87■□□□□ 0.13
HDDC3-205ENST00000559898 FAF1Q9UNN5 650 aaPredicted RBP15.87■□□□□ 0.13
HDDC3-205ENST00000559898 RAP2CQ9Y3L5 183 aa15.87■□□□□ 0.13
HDDC3-205ENST00000559898 RAI1Q7Z5J4 1906 aaPredicted RBP15.86■□□□□ 0.13
HDDC3-205ENST00000559898 FREM1Q5H8C1 2179 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 A0A087WZY1 265 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 C7orf72A4D263 438 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 ADAMDEC1O15204 470 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 BIRC5O15392 142 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 RAF1P04049 648 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 THBDP07204 575 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 ALDOCP09972 364 aaKnown RBP15.86■□□□□ 0.13
HDDC3-205ENST00000559898 HPGDP15428 266 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 CD53P19397 219 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 ZNF41P51814 821 aaPredicted RBP15.86■□□□□ 0.13
HDDC3-205ENST00000559898 RAC1P63000 192 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 ADAM8P78325 824 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 BST1Q10588 318 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 FUT5Q11128 374 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 MAPK14Q16539 360 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 LSM12Q3MHD2 195 aaKnown RBP15.86■□□□□ 0.13
HDDC3-205ENST00000559898 PDZK1Q5T2W1 519 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 HBMQ6B0K9 141 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 FAM214BQ7L5A3 538 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 WDR75Q8IWA0 830 aaKnown RBP15.86■□□□□ 0.13
HDDC3-205ENST00000559898 LILRA2Q8N149 483 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 ZNF614Q8N883 585 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 ANKRD42Q8N9B4 389 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 ATP6V1C2Q8NEY4 427 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 GPR119Q8TDV5 335 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 ACTRT2Q8TDY3 377 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 ZBTB8AQ96BR9 441 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 GSX1Q9H4S2 264 aaPredicted RBP15.86■□□□□ 0.13
HDDC3-205ENST00000559898 NEUROD4Q9HD90 331 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 SSU72Q9NP77 194 aaKnown RBP15.86■□□□□ 0.13
HDDC3-205ENST00000559898 PROCRQ9UNN8 238 aa15.86■□□□□ 0.13
HDDC3-205ENST00000559898 ACANP16112 2415 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 RNF103-CHMP3A0A140T963 221 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 PRAMEF27A3QJZ7 478 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 CPSF4O95639 269 aaKnown RBP15.85■□□□□ 0.13
HDDC3-205ENST00000559898 CD8BP10966 210 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 CD99P14209 185 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 ATP6V1C1P21283 382 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 MATN1P21941 496 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 IL12AP29459 219 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 KCNJ5P48544 419 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 RPL14P50914 215 aaKnown RBP15.85■□□□□ 0.13
HDDC3-205ENST00000559898 ATP12AP54707 1039 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 PLAURQ03405 335 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 GPR68Q15743 365 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 DEFB113Q30KQ7 82 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 SPANXN4Q5MJ08 99 aa15.85■□□□□ 0.13
HDDC3-205ENST00000559898 WFDC11Q8NEX6 87 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms