RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CSTF3Q12996 717 aaKnown RBP5.2□□□□□ -1.58
USP3-215ENST00000559771 MPP2Q14168 576 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 ACKR1Q16570 336 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.2□□□□□ -1.58
USP3-215ENST00000559771 TSNAXIP1Q2TAA8 658 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 EXOSC6Q5RKV6 272 aaKnown RBP5.2□□□□□ -1.58
USP3-215ENST00000559771 C6orf163Q5TEZ5 329 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 HHATQ5VTY9 493 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 GALNT18Q6P9A2 607 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 AAGABQ6PD74 315 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 PRSS57Q6UWY2 283 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 TIFABQ6ZNK6 161 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 GRAMD2AQ8IUY3 354 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 SLC44A2Q8IWA5 706 aaPredicted RBP5.2□□□□□ -1.58
USP3-215ENST00000559771 UBQLNLQ8IYU4 475 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 BANPQ8N9N5 519 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 ZNF610Q8N9Z0 462 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 UHMK1Q8TAS1 419 aaKnown RBP5.2□□□□□ -1.58
USP3-215ENST00000559771 FNDC9Q8TBE3 224 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 ACMSDQ8TDX5 336 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 HOXB13Q92826 284 aaPredicted RBP5.2□□□□□ -1.58
USP3-215ENST00000559771 PIK3IP1Q96FE7 263 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 Q96MF0 132 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 ZNF382Q96SR6 550 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 SIKE1Q9BRV8 207 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 FAIM2Q9BWQ8 316 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 EBPLQ9BY08 206 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 RABEP2Q9H5N1 569 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 TNFRSF12AQ9NP84 129 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 SLC35C2Q9NQQ7 365 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 FGFR1OP2Q9NVK5 253 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 SIRT5Q9NXA8 310 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 MED11Q9P086 117 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 NDRG3Q9UGV2 375 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 DKKL1Q9UK85 242 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 PSME2Q9UL46 239 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 SNX6Q9UNH7 406 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 TIMM22Q9Y584 194 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 ZNF780BQ9Y6R6 833 aa5.2□□□□□ -1.58
USP3-215ENST00000559771 A0A087WV62 115 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 IGLV3-32A0A0A0MS00 114 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 INAFM1C9JVW0 142 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 BIRC5O15392 142 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 MGRN1O60291 552 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 EDF1O60869 148 aaKnown RBP5.19□□□□□ -1.58
USP3-215ENST00000559771 SMPD2O60906 423 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 ULK1O75385 1050 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 BCAS2O75934 225 aaPredicted RBP5.19□□□□□ -1.58
USP3-215ENST00000559771 SUPT7LO94864 414 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 SOX30O94993 753 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 IL33O95760 270 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 RPLP1P05386 114 aaKnown RBP5.19□□□□□ -1.58
USP3-215ENST00000559771 JUNP05412 331 aaKnown RBP5.19□□□□□ -1.58
USP3-215ENST00000559771 DHRS4L1P0CG22 281 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 TROVE2P10155 538 aaKnown RBP eCLIP5.19□□□□□ -1.58
USP3-215ENST00000559771 PEPDP12955 493 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 HK1P19367 917 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 DDCP20711 480 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 PSMA4P25789 261 aaKnown RBP5.19□□□□□ -1.58
USP3-215ENST00000559771 IL12BP29460 328 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 TIA1P31483 386 aaKnown RBP eCLIP5.19□□□□□ -1.58
USP3-215ENST00000559771 DIO3P55073 304 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 EEF1A1P68104 462 aaKnown RBP5.19□□□□□ -1.58
USP3-215ENST00000559771 SIRPAP78324 504 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 EFR3AQ14156 821 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 PON3Q15166 354 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 SNCBQ16143 134 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 CTU2Q2VPK5 515 aaKnown RBP5.19□□□□□ -1.58
USP3-215ENST00000559771 CYP27C1Q4G0S4 372 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 EEF1A1P5Q5VTE0 462 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 OR2A2Q6IF42 318 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 FAM71E1Q6IPT2 247 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 SCIMPQ6UWF3 145 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 TMEM107Q6UX40 140 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 STAC2Q6ZMT1 411 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 MARCH3Q86UD3 253 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 LCA5Q86VQ0 697 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 FAM9CQ8IZT9 166 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 OR2L13Q8N349 312 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 METTL25Q8N6Q8 603 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 CNEP1R1Q8N9A8 125 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 ANKRD42Q8N9B4 389 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 CCDC63Q8NA47 563 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 LILRB1Q8NHL6 650 aaPredicted RBP5.19□□□□□ -1.58
USP3-215ENST00000559771 DUSP19Q8WTR2 217 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 MZB1Q8WU39 189 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 PIGTQ969N2 578 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 L3HYPDHQ96EM0 354 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 C1GALT1C1Q96EU7 318 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 PERPQ96FX8 193 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 ZC3HAV1LQ96H79 300 aaKnown RBP5.19□□□□□ -1.58
USP3-215ENST00000559771 APOPT1Q96IL0 206 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 ADGRG7Q96K78 797 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 ANKRD27Q96NW4 1050 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 LRRC37BQ96QE4 947 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 RAB3IPQ96QF0 476 aaPredicted RBP5.19□□□□□ -1.58
USP3-215ENST00000559771 DIRC2Q96SL1 478 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 TMEM204Q9BSN7 226 aa5.19□□□□□ -1.58
USP3-215ENST00000559771 LMF2Q9BU23 707 aaKnown RBP5.19□□□□□ -1.58
USP3-215ENST00000559771 PINK1Q9BXM7 581 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms