RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ARMCX1Q9P291 453 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 LEF1Q9UJU2 399 aaPredicted RBP16.92■□□□□ 0.3
CASC4-209ENST00000559222 ICAM5Q9UMF0 924 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 MRPS18CQ9Y3D5 142 aaKnown RBP16.92■□□□□ 0.3
CASC4-209ENST00000559222 ZNF337Q9Y3M9 751 aa16.92■□□□□ 0.3
CASC4-209ENST00000559222 FIGNL2A6NMB9 653 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 TOXO94900 526 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 ACTL6AO96019 429 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 NR2F1P10589 423 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 UBL4AP11441 157 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 IL11P20809 199 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 COL8A1P27658 744 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 LSP1P33241 339 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 CLDN15P56746 228 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 PMPCAQ10713 525 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 SKP2Q13309 424 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 FGFBP1Q14512 234 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 GANABQ14697 944 aaKnown RBP16.91■□□□□ 0.3
CASC4-209ENST00000559222 ZNF630Q2M218 657 aaPredicted RBP16.91■□□□□ 0.3
CASC4-209ENST00000559222 DHDDSQ86SQ9 333 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 CCDC71Q8IV32 467 aaPredicted RBP16.91■□□□□ 0.3
CASC4-209ENST00000559222 PHF10Q8WUB8 498 aaKnown RBP16.91■□□□□ 0.3
CASC4-209ENST00000559222 SLC38A5Q8WUX1 472 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 TMEM19Q96HH6 336 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 ELAC2Q9BQ52 826 aaKnown RBP16.91■□□□□ 0.3
CASC4-209ENST00000559222 TUBA1CQ9BQE3 449 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 TTYH2Q9BSA4 534 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 PTGES2Q9H7Z7 377 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 POLE3Q9NRF9 147 aa16.91■□□□□ 0.3
CASC4-209ENST00000559222 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.91■□□□□ 0.3
CASC4-209ENST00000559222 USP9YO00507 2555 aaPredicted RBP16.91■□□□□ 0.3
CASC4-209ENST00000559222 DOCK7Q96N67 2140 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 H3BML4 177 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 ADAM11O75078 769 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 WDR1O75083 606 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 CYP7B1O75881 506 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 SNRPB2P08579 225 aaKnown RBP16.9■□□□□ 0.3
CASC4-209ENST00000559222 TFPTP0C1Z6 253 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 LINGO3P0C6S8 592 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 ZNF708P17019 499 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 RPS4Y1P22090 263 aaKnown RBP16.9■□□□□ 0.3
CASC4-209ENST00000559222 GNGT1P63211 74 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 HPCAP84074 193 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 FOXF1Q12946 379 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 CAPRIN1Q14444 709 aaKnown RBP16.9■□□□□ 0.3
CASC4-209ENST00000559222 AP1ARQ63HQ0 302 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 B3GNT6Q6ZMB0 384 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 LRRC74BQ6ZQY2 392 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 MTERF4Q7Z6M4 381 aaKnown RBP16.9■□□□□ 0.3
CASC4-209ENST00000559222 MISPQ8IVT2 679 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 UBQLNLQ8IYU4 475 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 TMCO5AQ8N6Q1 288 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 SMPDL3BQ92485 455 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 SLC39A3Q9BRY0 314 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 RSPO3Q9BXY4 272 aaPredicted RBP16.9■□□□□ 0.3
CASC4-209ENST00000559222 P2RX2Q9UBL9 471 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 RNF6Q9Y252 685 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 NDUFAF1Q9Y375 327 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 DSPPQ9NZW4 1301 aa16.9■□□□□ 0.3
CASC4-209ENST00000559222 GTPBP1O00178 669 aaKnown RBP16.89■□□□□ 0.29
CASC4-209ENST00000559222 ANGPT2O15123 496 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 OPN1LWP04000 364 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 GUSBP08236 651 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 UBTFL6P0CB48 400 aaPredicted RBP16.89■□□□□ 0.29
CASC4-209ENST00000559222 BMP2P12643 396 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 CHMP24386 653 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 PSMA4P25789 261 aaKnown RBP16.89■□□□□ 0.29
CASC4-209ENST00000559222 GRNP28799 593 aaKnown RBP16.89■□□□□ 0.29
CASC4-209ENST00000559222 SHC1P29353 583 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 PGM1P36871 562 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 P2RX1P51575 399 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 CCR4P51679 360 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 SUCLG1P53597 346 aaKnown RBP16.89■□□□□ 0.29
CASC4-209ENST00000559222 CLDN20P56880 219 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 MTPNP58546 118 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 RUNDC3AQ59EK9 446 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 SPATA21Q7Z572 469 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 SNX32Q86XE0 403 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 VRK2Q86Y07 508 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 DPP10Q8N608 796 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 NAXEQ8NCW5 288 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 FAM71CQ8NEG0 241 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 GPR119Q8TDV5 335 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 CNOT9Q92600 299 aaKnown RBP16.89■□□□□ 0.29
CASC4-209ENST00000559222 SDCCAG3Q96C92 435 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 RNF145Q96MT1 663 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 TRIB1Q96RU8 372 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 PLEKHB1Q9UF11 243 aaPredicted RBP16.89■□□□□ 0.29
CASC4-209ENST00000559222 LIPT1Q9Y234 373 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 CACNA1CQ13936 2221 aa16.89■□□□□ 0.29
CASC4-209ENST00000559222 SPTAN1Q13813 2472 aaKnown RBP16.89■□□□□ 0.29
CASC4-209ENST00000559222 A0A0G2JNJ9 132 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 AGAP5A6NIR3 686 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 H0Y3Z8 333 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 H3BNH8 94 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 ZNF264O43296 627 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 SEC14L5O43304 696 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 EFNA2O43921 213 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 CSTAP01040 98 aa16.88■□□□□ 0.29
CASC4-209ENST00000559222 CPN1P15169 458 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms