RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 COQ2Q96H96 371 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 SLC38A2Q96QD8 506 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 LITAFQ99732 161 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 CITED1Q99966 193 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 TUBGCP2Q9BSJ2 902 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 FGFBP2Q9BYJ0 223 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 MCCC2Q9HCC0 563 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 SMOXQ9NWM0 555 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 RAB20Q9NX57 234 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 SLC2A8Q9NY64 477 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 BFARQ9NZS9 450 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 SPATA7Q9P0W8 599 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 TMEM181Q9P2C4 612 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 ONECUT1Q9UBC0 465 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 MLXQ9UH92 298 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 ADAM28Q9UKQ2 775 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 GAB2Q9UQC2 676 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 NTNG1Q9Y2I2 539 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 MOB4Q9Y3A3 225 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 MRPL11Q9Y3B7 192 aaKnown RBP1.89□□□□□ -2.11
GABPB1-209ENST00000559100 TIMM10BQ9Y5J6 103 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 NPTNQ9Y639 398 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 MYH15Q9Y2K3 1946 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 FRMPD4Q14CM0 1322 aa1.89□□□□□ -2.11
GABPB1-209ENST00000559100 RPAP1Q9BWH6 1393 aaPredicted RBP1.88□□□□□ -2.11
GABPB1-209ENST00000559100 A0A075B6Q4 140 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 SAGE2PA6NJ88 616 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 SNTNA6NMZ2 147 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 ZNF716A6NP11 495 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 CYSRT1A8MQ03 144 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 FOXI3A8MTJ6 420 aaPredicted RBP1.88□□□□□ -2.11
GABPB1-209ENST00000559100 E9PLD3 99 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 F5H6K3 240 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 KIF2AO00139 706 aaPredicted RBP1.88□□□□□ -2.11
GABPB1-209ENST00000559100 ABCD4O14678 606 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 RNF13O43567 381 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 EDIL3O43854 480 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 ECI2O75521 394 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 RHBDL1O75783 438 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 TSPAN12O95859 305 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 PGK1P00558 417 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 AGTP01019 485 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 IGHG1P01857 330 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 ZNF735P0CB33 412 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 GALP22466 123 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 MMP11P24347 488 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 LMO2P25791 158 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 EPHX2P34913 555 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 NF2P35240 595 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 SYKP43405 635 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 P2RY1P47900 373 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 CASP4P49662 377 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 EFNB2P52799 333 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 ATP12AP54707 1039 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 HMGCS2P54868 508 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 MS4A2Q01362 244 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 GBE1Q04446 702 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 KLRC3Q07444 240 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 CD300CQ08708 224 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 RIPPLY1Q0D2K3 151 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 RAB40BQ12829 278 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 SRSF5Q13243 272 aaKnown RBP1.88□□□□□ -2.11
GABPB1-209ENST00000559100 NDUFA9Q16795 377 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 PPP1R3AQ16821 1122 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 CYP51A1Q16850 503 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 SLC5A12Q1EHB4 618 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 MICAQ29983 383 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 TMEM30BQ3MIR4 351 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 C2CD6Q53TS8 623 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 VWA2Q5GFL6 755 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 DMRTC1Q5HYR2 192 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 CTSL3PQ5NE16 218 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 BEND3Q5T5X7 828 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 CARD17Q5XLA6 110 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 FAM71F2Q6NXP2 309 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 FAHD2BQ6P2I3 314 aaPredicted RBP1.88□□□□□ -2.11
GABPB1-209ENST00000559100 RFWD3Q6PCD5 774 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 UQCC3Q6UW78 93 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 C19orf35Q6ZS72 473 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 C18orf65Q6ZTR6 163 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 TMUB2Q71RG4 321 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 CENPQQ7L2Z9 268 aaPredicted RBP1.88□□□□□ -2.11
GABPB1-209ENST00000559100 NOTCH2NLQ7Z3S9 236 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 LRRC49Q8IUZ0 686 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 SLC22A18ASQ8N1D0 253 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 KIR3DL3Q8N743 410 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 CEP112Q8N8E3 955 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 C4orf32Q8N8J7 132 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 MFSD9Q8NBP5 474 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 PRSS33Q8NF86 280 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 KCNG3Q8TAE7 436 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 AGR3Q8TD06 166 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 SLC2A14Q8TDB8 520 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 SCFD1Q8WVM8 642 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 RAPGEF5Q92565 580 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 C10orf35Q96D05 121 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 WBP1Q96G27 269 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 FAHD2AQ96GK7 314 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 C18orf12Q96KH6 178 aa1.88□□□□□ -2.11
GABPB1-209ENST00000559100 IFT74Q96LB3 600 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms