RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 ZIC3O60481 467 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 BCAS1O75363 584 aaPredicted RBP14.08□□□□□ -0.16
LINC01220-201ENST00000558575 CBR3O75828 277 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 HPNP05981 417 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 NR2F1P10589 423 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 ENDOUP21128 410 aaKnown RBP14.08□□□□□ -0.16
LINC01220-201ENST00000558575 PPIBP23284 216 aaKnown RBP14.08□□□□□ -0.16
LINC01220-201ENST00000558575 ANXA11P50995 505 aaKnown RBP14.08□□□□□ -0.16
LINC01220-201ENST00000558575 GZMMP51124 257 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 ART1P52961 327 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 MTPNP58546 118 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 PLAURQ03405 335 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 TLE4Q04727 773 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 C17orf67Q0P5P2 114 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 FADDQ13158 208 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 TRMT5Q32P41 509 aaKnown RBP14.08□□□□□ -0.16
LINC01220-201ENST00000558575 EIPR1Q53HC9 387 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 PDZK1Q5T2W1 519 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 GFRALQ6UXV0 394 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 TRILQ7L0X0 811 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 ZNF619Q8N2I2 560 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 ZNF524Q96C55 264 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 MCCC2Q9HCC0 563 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 POLE3Q9NRF9 147 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 SDHAF3Q9NRP4 125 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 QPCTLQ9NXS2 382 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 DTNAQ9Y4J8 743 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 DNAJC13O75165 2243 aa14.08□□□□□ -0.16
LINC01220-201ENST00000558575 INTS1Q8N201 2190 aaKnown RBP14.07□□□□□ -0.16
LINC01220-201ENST00000558575 NCKAP5O14513 1909 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 TRGV8A0A0C4DH27 118 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 A0A1B0GTH9 108 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 SERINC4A6NH21 518 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 SCDO00767 359 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 NDUFB5O43674 189 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 NPPAP01160 153 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 FREM3P0C091 2139 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 GDF1P27539 372 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 CLK3P49761 638 aaKnown RBP14.07□□□□□ -0.16
LINC01220-201ENST00000558575 ADORA2A-AS1P86434 159 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 NDUFAF6Q330K2 333 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 MMEL1Q495T6 779 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 RABL3Q5HYI8 236 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 CBLN3Q6UW01 205 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 RPTNQ6XPR3 784 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 YRDCQ86U90 279 aaKnown RBP14.07□□□□□ -0.16
LINC01220-201ENST00000558575 PTOV1Q86YD1 416 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 SPPL2CQ8IUH8 684 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 TMEM19Q96HH6 336 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 GPATCH1Q9BRR8 931 aaKnown RBP14.07□□□□□ -0.16
LINC01220-201ENST00000558575 SLC6A15Q9H2J7 730 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 RAD21L1Q9H4I0 556 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 KAT8Q9H7Z6 458 aaKnown RBP14.07□□□□□ -0.16
LINC01220-201ENST00000558575 MTHFD2LQ9H903 347 aaPredicted RBP14.07□□□□□ -0.16
LINC01220-201ENST00000558575 A4GALTQ9NPC4 353 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 PPP4R1LQ9P1A2 415 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 ZNF835Q9Y2P0 537 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 DSPPQ9NZW4 1301 aa14.07□□□□□ -0.16
LINC01220-201ENST00000558575 COL6A5A8TX70 2615 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 CSPG4Q6UVK1 2322 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 AGAP5A6NIR3 686 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 CLDN24A6NM45 220 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 EVPLLA8MZ36 301 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 AIM2O14862 343 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 CDC40O60508 579 aaKnown RBP eCLIP14.06□□□□□ -0.16
LINC01220-201ENST00000558575 TRAPPC6AO75865 159 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 BCHEP06276 602 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 ARAFP10398 606 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 RPS4Y1P22090 263 aaKnown RBP14.06□□□□□ -0.16
LINC01220-201ENST00000558575 SLC6A2P23975 617 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 RPS26P11Q5JNZ5 115 aaPredicted RBP14.06□□□□□ -0.16
LINC01220-201ENST00000558575 WIPI1Q5MNZ9 446 aaPredicted RBP14.06□□□□□ -0.16
LINC01220-201ENST00000558575 GCNT6Q5T4J0 391 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 GKAP1Q5VSY0 366 aaPredicted RBP14.06□□□□□ -0.16
LINC01220-201ENST00000558575 FAM91A1Q658Y4 838 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 C8orf82Q6P1X6 216 aaPredicted RBP14.06□□□□□ -0.16
LINC01220-201ENST00000558575 GHDCQ8N2G8 530 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 FITM2Q8N6M3 262 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 FAM83FQ8NEG4 500 aaPredicted RBP14.06□□□□□ -0.16
LINC01220-201ENST00000558575 PHOSPHO1Q8TCT1 267 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 LRRC37BQ96QE4 947 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 TREX2Q9BQ50 279 aaPredicted RBP14.06□□□□□ -0.16
LINC01220-201ENST00000558575 THUMPD3Q9BV44 507 aaKnown RBP14.06□□□□□ -0.16
LINC01220-201ENST00000558575 OR2B2Q9GZK3 357 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 TMEM38AQ9H6F2 299 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 BCL2L10Q9HD36 194 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 ARL8BQ9NVJ2 186 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 THUMPD1Q9NXG2 353 aaKnown RBP14.06□□□□□ -0.16
LINC01220-201ENST00000558575 SPRR3Q9UBC9 169 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 P2RX2Q9UBL9 471 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 TNFRSF10DQ9UBN6 386 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 B4GALT7Q9UBV7 327 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 SLC6A5Q9Y345 797 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 CHST2Q9Y4C5 530 aa14.06□□□□□ -0.16
LINC01220-201ENST00000558575 TRGV5A0A0B4J1U4 118 aa14.05□□□□□ -0.16
LINC01220-201ENST00000558575 GMFGO60234 142 aa14.05□□□□□ -0.16
LINC01220-201ENST00000558575 SUSD5O60279 629 aa14.05□□□□□ -0.16
LINC01220-201ENST00000558575 HCN1O60741 890 aa14.05□□□□□ -0.16
LINC01220-201ENST00000558575 GCM2O75603 506 aaPredicted RBP14.05□□□□□ -0.16
LINC01220-201ENST00000558575 HPGDP15428 266 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms