RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 TRIM2Q9C040 744 aa13.62□□□□□ -0.23
VPS18-202ENST00000558474 ANKRD19PQ9H560 264 aa13.62□□□□□ -0.23
VPS18-202ENST00000558474 METTL7AQ9H8H3 244 aa13.62□□□□□ -0.23
VPS18-202ENST00000558474 C8orf4Q9NR00 106 aa13.62□□□□□ -0.23
VPS18-202ENST00000558474 KCNMB2Q9Y691 235 aa13.62□□□□□ -0.23
VPS18-202ENST00000558474 ADAM10O14672 748 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 SNX4O95219 450 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 OR5F1O95221 314 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 TNFRSF1BP20333 461 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 ACAA2P42765 397 aaKnown RBP13.61□□□□□ -0.23
VPS18-202ENST00000558474 P2RX1P51575 399 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 ARHGDIAP52565 204 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 PLAURQ03405 335 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 EPS8Q12929 822 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 CD226Q15762 336 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 NPTX1Q15818 432 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 SNCBQ16143 134 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 DEFB109BQ30KR1 87 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 FBXW10Q5XX13 1052 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 HMBOX1Q6NT76 420 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 ZNF613Q6PF04 617 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 IGFL2Q6UWQ7 119 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 MARCH3Q86UD3 253 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 LACC1Q8IV20 430 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 OFCC1Q8IZS5 231 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 SVOPLQ8N434 492 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 PIK3C3Q8NEB9 887 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 CATSPER1Q8NEC5 780 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 OR5M3Q8NGP4 307 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 HAS2Q92819 552 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 ARSGQ96EG1 525 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 DTNBP1Q96EV8 351 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 EPYCQ99645 322 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 MCHR1Q99705 422 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 OSBPL11Q9BXB4 747 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 VCX3BQ9H321 246 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 ZNF552Q9H707 407 aaPredicted RBP13.61□□□□□ -0.23
VPS18-202ENST00000558474 REEP1Q9H902 201 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 TMEM27Q9HBJ8 222 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 TIMMDC1Q9NPL8 285 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 SACM1LQ9NTJ5 587 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 GPR83Q9NYM4 423 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 KLRF1Q9NZS2 232 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 NKX1-2Q9UD57 310 aaPredicted RBP13.61□□□□□ -0.23
VPS18-202ENST00000558474 CNOT11Q9UKZ1 510 aaKnown RBP13.61□□□□□ -0.23
VPS18-202ENST00000558474 A4GNTQ9UNA3 340 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 WIF1Q9Y5W5 379 aa13.61□□□□□ -0.23
VPS18-202ENST00000558474 NINQ8N4C6 2090 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 A0A1W2PRQ8 180 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 TMEM8BA6NDV4 472 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 K7ENP7 123 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 MT-ND1P03886 318 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 P04436 131 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 UBTFL6P0CB48 400 aaPredicted RBP13.6□□□□□ -0.23
VPS18-202ENST00000558474 DNAJA1P31689 397 aaKnown RBP13.6□□□□□ -0.23
VPS18-202ENST00000558474 PTGDSP41222 190 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 TMPRSS3P57727 454 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 TAS2R41P59536 307 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 COPZ1P61923 177 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 ZNF117Q03924 483 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 TLE3Q04726 772 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 ST3GAL3Q11203 375 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 TUBA3CQ13748 450 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 CBFBQ13951 182 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 DGCR6Q14129 220 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 COLEC12Q5KU26 742 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 ENTPD8Q5MY95 495 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 SWT1Q5T5J6 900 aaKnown RBP13.6□□□□□ -0.23
VPS18-202ENST00000558474 DESI1Q6ICB0 168 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 TUBA3EQ6PEY2 450 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 INO80CQ6PI98 192 aaPredicted RBP13.6□□□□□ -0.23
VPS18-202ENST00000558474 DEF8Q6ZN54 512 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 HIPK1Q86Z02 1210 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 RBM45Q8IUH3 476 aaKnown RBP13.6□□□□□ -0.23
VPS18-202ENST00000558474 LINC00471Q8N535 108 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 OR5W2Q8NH69 310 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 B4GALNT2Q8NHY0 566 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 TMEM41AQ96HV5 264 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 WFDC6Q9BQY6 131 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 C12orf10Q9HB07 376 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 LRFN1Q9P244 771 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 ICAM5Q9UMF0 924 aa13.6□□□□□ -0.23
VPS18-202ENST00000558474 A0A087WV48 116 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 TRAPPC13A5PLN9 417 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 HCRTR2O43614 444 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 SCO2O43819 266 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 TPST2O60704 377 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 SEMA7AO75326 666 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 GADD45GO95257 159 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 H1F0P07305 194 aaKnown RBP13.59□□□□□ -0.23
VPS18-202ENST00000558474 LINGO3P0C6S8 592 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 PGCP20142 388 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 FPR1P21462 350 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 RRM2P31350 389 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 CD96P40200 585 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 ZNF468Q5VIY5 522 aaPredicted RBP13.59□□□□□ -0.23
VPS18-202ENST00000558474 WBP2NLQ6ICG8 309 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 PLEKHM3Q6ZWE6 761 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 AMIGO2Q86SJ2 522 aa13.59□□□□□ -0.23
VPS18-202ENST00000558474 OR5K1Q8NHB7 308 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms