RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 ZAR1Q86SH2 424 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 GALNT10Q86SR1 603 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 ZADH2Q8N4Q0 377 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 TMEM178AQ8NBL3 297 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 FAM98AQ8NCA5 519 aaKnown RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 FAM71CQ8NEG0 241 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 GPR32P1Q8NGA4 272 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 OR10G3Q8NGC4 313 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 OR5M3Q8NGP4 307 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 OR5W2Q8NH69 310 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 B4GALNT2Q8NHY0 566 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 GRHL3Q8TE85 626 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 DNAJA4Q8WW22 397 aaPredicted RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 PYDC1Q8WXC3 89 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 ZG16BQ96DA0 208 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 NRBF2Q96F24 287 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 CENPNQ96H22 339 aaPredicted RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 TMEM41AQ96HV5 264 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 ZNF300Q96RE9 604 aaPredicted RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 SMAD5Q99717 465 aaKnown RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 PIP5K1AQ99755 562 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 FNDC11Q9BVV2 318 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 QRSL1Q9H0R6 528 aaKnown RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 ZNF552Q9H707 407 aaPredicted RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 REEP1Q9H902 201 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 RNPEPL1Q9HAU8 725 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 KRCC1Q9NPI7 259 aaPredicted RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 PPP4R1LQ9P1A2 415 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 STOML1Q9UBI4 398 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 ZMIZ1Q9ULJ6 1067 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 BOKQ9UMX3 212 aaPredicted RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 WIF1Q9Y5W5 379 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 CHCHD2Q9Y6H1 151 aaPredicted RBP11.36□□□□□ -0.59
TPM1-209ENST00000558072 V9GYQ6 96 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 APC2O95996 2303 aa11.36□□□□□ -0.59
TPM1-209ENST00000558072 ACACAQ13085 2346 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 CEP295Q9C0D2 2601 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 A0A087WZY1 265 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 NPIPA5A0A0B4J1W7 369 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 NPIPA7E9PJI5 369 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 CLOCKO15516 846 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 HCRTR2O43614 444 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 TPST1O60507 370 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 OR5F1O95221 314 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 BAG2O95816 211 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 UBTFL6P0CB48 400 aaPredicted RBP11.35□□□□□ -0.59
TPM1-209ENST00000558072 NPIPA8P0DM63 369 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 CD96P40200 585 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 MASP1P48740 699 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 TAS2R41P59536 307 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 CXADRP78310 365 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 TUBA3CQ13748 450 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 RCN1Q15293 331 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 ATP6AP1Q15904 470 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 FNDC7Q5VTL7 733 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 OR2T5Q6IEZ7 315 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 TUBA3EQ6PEY2 450 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 PQLC1Q8N2U9 271 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 CLIP4Q8N3C7 705 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 SVOPLQ8N434 492 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 LSMEM1Q8N8F7 131 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 PSD4Q8NDX1 1056 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 CATSPER1Q8NEC5 780 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 OR2T29Q8NH02 315 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 ARSGQ96EG1 525 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 MPP4Q96JB8 637 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 C7orf34Q96L11 122 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 PRRC1Q96M27 445 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 FRMD6Q96NE9 622 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 NODALQ96S42 347 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 MCHR1Q99705 422 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 FAM173AQ9BQD7 235 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPM1-209ENST00000558072 VCXQ9H320 206 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 C12orf10Q9HB07 376 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 SH2D2AQ9NP31 389 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 DNAJB12Q9NXW2 375 aaKnown RBP11.35□□□□□ -0.59
TPM1-209ENST00000558072 NDUFAF4Q9P032 175 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 B4GALT7Q9UBV7 327 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 KCNE5Q9UJ90 142 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 CNOT11Q9UKZ1 510 aaKnown RBP11.35□□□□□ -0.59
TPM1-209ENST00000558072 TMCC3Q9ULS5 477 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 IGF2RP11717 2491 aa11.35□□□□□ -0.59
TPM1-209ENST00000558072 URB1O60287 2271 aaKnown RBP11.34□□□□□ -0.59
TPM1-209ENST00000558072 TNRC6AQ8NDV7 1962 aaKnown RBP11.34□□□□□ -0.59
TPM1-209ENST00000558072 TRAV17A0A0B4J275 112 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 SCO2O43819 266 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 ZNF354AO60765 605 aaPredicted RBP11.34□□□□□ -0.59
TPM1-209ENST00000558072 E2F6O75461 281 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 SLC25A12O75746 678 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 CBR3O75828 277 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 CYP7B1O75881 506 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 WDPCPO95876 746 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 F10P00742 488 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 PNMTP11086 282 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 ANPEPP15144 967 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 IFNGR2P38484 337 aa11.34□□□□□ -0.59
TPM1-209ENST00000558072 EIF1P41567 113 aaKnown RBP11.34□□□□□ -0.59
TPM1-209ENST00000558072 ZNF41P51814 821 aaPredicted RBP11.34□□□□□ -0.59
TPM1-209ENST00000558072 SLC34A1Q06495 639 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms