RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 MS4A4EQ96PG1 132 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 FERD3LQ96RJ6 166 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 CACNG6Q9BXT2 260 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 HDAC8Q9BY41 377 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 ZCCHC4Q9H5U6 513 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 MRPS30Q9NP92 439 aaKnown RBP15.15■□□□□ 0.02
SHMT2-231ENST00000557433 AKAP7Q9P0M2 348 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-231ENST00000557433 ABT1Q9ULW3 272 aaKnown RBP15.15■□□□□ 0.02
SHMT2-231ENST00000557433 SLC7A7Q9UM01 511 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 CAMK2AQ9UQM7 478 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 PRKAB1Q9Y478 270 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 SPEF1Q9Y4P9 236 aa15.15■□□□□ 0.02
SHMT2-231ENST00000557433 PCYT1BQ9Y5K3 369 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-231ENST00000557433 TRAV6A0A075B6T7 132 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 PRR23D1E9PI22 279 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-231ENST00000557433 FMO6PO60774 539 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 PRAF2O60831 178 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 RHOP08100 348 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 H2AFB2P0C5Z0 115 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 PRR23D2P0DMB1 279 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-231ENST00000557433 IFI30P13284 250 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 POLR2CP19387 275 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-231ENST00000557433 RAB3BP20337 219 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 CLCNKAP51800 687 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 METAP1P53582 386 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 STXBP1P61764 594 aaKnown RBP15.14■□□□□ 0.01
SHMT2-231ENST00000557433 DUSP8Q13202 625 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 SNTA1Q13424 505 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 GAS6Q14393 721 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 ARHGAP11BQ3KRB8 267 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 FNDC3BQ53EP0 1204 aaKnown RBP15.14■□□□□ 0.01
SHMT2-231ENST00000557433 LYPD4Q6UWN0 246 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 FRRS1Q6ZNA5 592 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 REM2Q8IYK8 340 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-231ENST00000557433 OR8H3Q8N146 312 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 TMEM99Q8N816 258 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 KISS1RQ969F8 398 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-231ENST00000557433 ZG16BQ96DA0 208 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 NXPE2Q96DL1 559 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 KLHL31Q9H511 634 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 POLMQ9NP87 494 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-231ENST00000557433 SIDT1Q9NXL6 827 aaKnown RBP15.14■□□□□ 0.01
SHMT2-231ENST00000557433 UBQLN2Q9UHD9 624 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 ZNF223Q9UK11 482 aaPredicted RBP15.14■□□□□ 0.01
SHMT2-231ENST00000557433 NPTNQ9Y639 398 aa15.14■□□□□ 0.01
SHMT2-231ENST00000557433 ANTXRLA6NF34 631 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 C1QTNF3-AMACRE9PGA6 284 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 CDC42EP2O14613 210 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 PPM1DO15297 605 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 ZNF749O43361 778 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 PIP5K1CO60331 668 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 PRKRAO75569 313 aaKnown RBP15.13■□□□□ 0.01
SHMT2-231ENST00000557433 CD1AP06126 327 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 ZGLP1P0C6A0 271 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 POU3F3P20264 500 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-231ENST00000557433 TEAD1P28347 426 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 PDX1P52945 283 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 DUSP2Q05923 314 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 GRK1Q15835 563 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 MAPK14Q16539 360 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 GSG1Q2KHT4 349 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 FAM69AQ5T7M9 428 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 DMKNQ6E0U4 476 aaPredicted RBP15.13■□□□□ 0.01
SHMT2-231ENST00000557433 MFSD12Q6NUT3 480 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 ASPGQ86U10 573 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 CDK20Q8IZL9 346 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 OR10H4Q8NGA5 316 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 OR9A2Q8NGT5 310 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 RPLP0P6Q8NHW5 317 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 PHYHIPQ92561 330 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 SLC35A4Q96G79 324 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 TOX2Q96NM4 488 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 CFHR5Q9BXR6 569 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 MAT2BQ9NZL9 334 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 FAM183AA6NL82 134 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 AGRPO00253 132 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 GPR171O14626 319 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 ARL6IP5O75915 188 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 TYRP1P17643 537 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 RAB14P61106 215 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 CAMK2DQ13557 499 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 B3GLCTQ6Y288 498 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 SIAH3Q8IW03 269 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 SLITRK4Q8IW52 837 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 TIGD4Q8IY51 512 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 HSD17B8Q92506 261 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 PMM1Q92871 262 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 C12orf10Q9HB07 376 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 EQTNQ9NQ60 294 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 PRDM9Q9NQV7 894 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 FBXL21Q9UKT6 434 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 SLC35A3Q9Y2D2 325 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 WDR45Q9Y484 360 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 FKBP7Q9Y680 259 aa15.13■□□□□ 0.01
SHMT2-231ENST00000557433 LTBP2Q14767 1821 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 NAP1L6A6NFF2 107 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 KCNJ13O60928 360 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 SBK2P0C263 348 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 DNASE1P24855 282 aa15.12■□□□□ 0.01
SHMT2-231ENST00000557433 GIFP27352 417 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms