RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 BEX5Q5H9J7 111 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 MTERF4Q7Z6M4 381 aaKnown RBP14.21□□□□□ -0.13
TUBB3-213ENST00000557262 STK32CQ86UX6 486 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 LILRA2Q8N149 483 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 NATD1Q8N6N6 113 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 PHOSPHO1Q8TCT1 267 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 OR5P2Q8WZ92 322 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 CDS1Q92903 461 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 ACTRT3Q9BYD9 372 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 TMEM185BQ9H7F4 350 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 SNX8Q9Y5X2 465 aa14.21□□□□□ -0.13
TUBB3-213ENST00000557262 ARID1AO14497 2285 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 LYPLA1O75608 230 aaPredicted RBP14.2□□□□□ -0.14
TUBB3-213ENST00000557262 SLU7O95391 586 aaKnown RBP14.2□□□□□ -0.14
TUBB3-213ENST00000557262 PABPC4LP0CB38 370 aaKnown RBP14.2□□□□□ -0.14
TUBB3-213ENST00000557262 ATP6V1C1P21283 382 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 ADH6P28332 368 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 LSM12Q3MHD2 195 aaKnown RBP14.2□□□□□ -0.14
TUBB3-213ENST00000557262 ATP6AP1LQ52LC2 224 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 KLHL26Q53HC5 615 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 CDC73Q6P1J9 531 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 PLEKHM3Q6ZWE6 761 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 RIBC1Q8N443 379 aaPredicted RBP14.2□□□□□ -0.14
TUBB3-213ENST00000557262 ZNF527Q8NB42 609 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 OR2W6PQ8NHA6 318 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 PSMA8Q8TAA3 256 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 ADAMTS15Q8TE58 950 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 REXO5Q96IC2 774 aaKnown RBP14.2□□□□□ -0.14
TUBB3-213ENST00000557262 KLHL15Q96M94 604 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 PRPF18Q99633 342 aaKnown RBP14.2□□□□□ -0.14
TUBB3-213ENST00000557262 KLHDC3Q9BQ90 382 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 BDH2Q9BUT1 245 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 MECRQ9BV79 373 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 OR10A4Q9H209 315 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 TIGARQ9NQ88 270 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 ATAD3AQ9NVI7 634 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 SLC17A7Q9P2U7 560 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 GIMAP2Q9UG22 337 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 FAF1Q9UNN5 650 aaPredicted RBP14.2□□□□□ -0.14
TUBB3-213ENST00000557262 GPR52Q9Y2T5 361 aa14.2□□□□□ -0.14
TUBB3-213ENST00000557262 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.19□□□□□ -0.14
TUBB3-213ENST00000557262 EFNA2O43921 213 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 TUBBP07437 444 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 KRT16P08779 473 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 P2RX1P51575 399 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 ZNF117Q03924 483 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 XKR7Q5GH72 579 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 C6orf136Q5SQH8 315 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 IL23RQ5VWK5 629 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 YTHDF3Q7Z739 585 aaKnown RBP14.19□□□□□ -0.14
TUBB3-213ENST00000557262 OR56A1Q8NGH5 318 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 PPP1R14CQ8TAE6 165 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 AGR3Q8TD06 166 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 ROBO4Q8WZ75 1007 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 COQ8BQ96D53 544 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 C3orf30Q96M34 536 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 Q96MF0 132 aa14.19□□□□□ -0.14
TUBB3-213ENST00000557262 H3BNH8 94 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 GTPBP1O00178 669 aaKnown RBP14.18□□□□□ -0.14
TUBB3-213ENST00000557262 ZNF195O14628 629 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 SPAG7O75391 227 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 NUDT14O95848 222 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 LY6G6DO95868 133 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 C6orf47O95873 294 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 HEXAP06865 529 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 PSMB1P20618 241 aaKnown RBP14.18□□□□□ -0.14
TUBB3-213ENST00000557262 ELK4P28324 431 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 AGTR1P30556 359 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 SFTPDP35247 375 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 SERPINB5P36952 375 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 ATP12AP54707 1039 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 NR1H2P55055 460 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 TP53BP2Q13625 1128 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 PTGR1Q14914 329 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 SPDYE7PQ495Y7 208 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 TMEM201Q5SNT2 666 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 DCST2Q5T1A1 773 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 CBLN3Q6UW01 205 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 ZCCHC23Q6ZST2 131 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 FBXO27Q8NI29 283 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 TCP10LQ8TDR4 215 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 CPNE4Q96A23 557 aaPredicted RBP14.18□□□□□ -0.14
TUBB3-213ENST00000557262 MOAP1Q96BY2 351 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 PERPQ96FX8 193 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 COX4I2Q96KJ9 171 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 C1orf50Q9BV19 199 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 HDHD5Q9BXW7 423 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 GSX2Q9BZM3 304 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 ACTR6Q9GZN1 396 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 C12orf49Q9H741 205 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 CXorf36Q9H7Y0 433 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 GPATCH2Q9NW75 528 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 ZDHHC2Q9UIJ5 367 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 ICAM5Q9UMF0 924 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 CARD8Q9Y2G2 431 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 ACTL7BQ9Y614 415 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 GPC6Q9Y625 555 aaPredicted RBP14.18□□□□□ -0.14
TUBB3-213ENST00000557262 KCNE3Q9Y6H6 103 aa14.18□□□□□ -0.14
TUBB3-213ENST00000557262 DSCAMO60469 2012 aa14.17□□□□□ -0.14
TUBB3-213ENST00000557262 NPIPA5A0A0B4J1W7 369 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms