RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 C1orf109Q9NX04 203 aa13.16□□□□□ -0.3
CHD8-211ENST00000556833 GPR52Q9Y2T5 361 aa13.16□□□□□ -0.3
CHD8-211ENST00000556833 RNF115Q9Y4L5 304 aa13.16□□□□□ -0.3
CHD8-211ENST00000556833 CCL27Q9Y4X3 112 aa13.16□□□□□ -0.3
CHD8-211ENST00000556833 SNX8Q9Y5X2 465 aa13.16□□□□□ -0.3
CHD8-211ENST00000556833 ALPK2Q86TB3 2170 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 CUBNO60494 3623 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 EFNA2O43921 213 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 GLRA3O75311 464 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 CRLF1O75462 422 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 GCM2O75603 506 aaPredicted RBP13.15□□□□□ -0.3
CHD8-211ENST00000556833 ADAP00813 363 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 CD3EP07766 207 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 UROSP10746 265 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 PSMB1P20618 241 aaKnown RBP13.15□□□□□ -0.3
CHD8-211ENST00000556833 MAP3K8P41279 467 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 OCRLQ01968 901 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 LASP1Q14847 261 aaKnown RBP13.15□□□□□ -0.3
CHD8-211ENST00000556833 KIAA0040Q15053 153 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 TAB1Q15750 504 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 TOMM34Q15785 309 aaPredicted RBP13.15□□□□□ -0.3
CHD8-211ENST00000556833 TMEM176BQ3YBM2 270 aaPredicted RBP13.15□□□□□ -0.3
CHD8-211ENST00000556833 TMEM201Q5SNT2 666 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 PDSS1Q5T2R2 415 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 CBLN3Q6UW01 205 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 LRIG3Q6UXM1 1119 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 TFAP2EQ6VUC0 442 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 LCA5Q86VQ0 697 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 TMCO5AQ8N6Q1 288 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 BANPQ8N9N5 519 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 CEP70Q8NHQ1 597 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 FBXO27Q8NI29 283 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 FAM76AQ8TAV0 307 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 ACMSDQ8TDX5 336 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 FBXW5Q969U6 566 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 ZBED6CLQ96FA7 236 aaPredicted RBP13.15□□□□□ -0.3
CHD8-211ENST00000556833 RHOXF2Q9BQY4 288 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 REEP4Q9H6H4 257 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 FANCFQ9NPI8 374 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 DCDC2Q9UHG0 476 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 GDF2Q9UK05 429 aaPredicted RBP13.15□□□□□ -0.3
CHD8-211ENST00000556833 LIPT1Q9Y234 373 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 CARD8Q9Y2G2 431 aa13.15□□□□□ -0.3
CHD8-211ENST00000556833 A0A1W2PNR3 127 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 A0A1W2PP18 115 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 TTC36A6NLP5 189 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 TMEM233B4DJY2 109 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 SLC28A1O00337 649 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 RGS14O43566 566 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 ADAM11O75078 769 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 LYZL6O75951 148 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 SHBGP04278 402 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 LINGO3P0C6S8 592 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 PAX1P15863 534 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 CCR4P51679 360 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 POU6F2P78424 691 aaPredicted RBP13.14□□□□□ -0.31
CHD8-211ENST00000556833 BSPH1Q075Z2 132 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 RFTN2Q52LD8 501 aaPredicted RBP13.14□□□□□ -0.31
CHD8-211ENST00000556833 CDC73Q6P1J9 531 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 TRMT10CQ7L0Y3 403 aaKnown RBP13.14□□□□□ -0.31
CHD8-211ENST00000556833 FCRLAQ7L513 359 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 TRABD2AQ86V40 505 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 DDIASQ8IXT1 998 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 MNS1Q8NEH6 495 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 STEAP2Q8NFT2 490 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 OR6Y1Q8NGX8 325 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 OR2W6PQ8NHA6 318 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 AGR3Q8TD06 166 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 RNF128Q8TEB7 428 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 SMAP2Q8WU79 429 aaPredicted RBP13.14□□□□□ -0.31
CHD8-211ENST00000556833 HOXB13Q92826 284 aaPredicted RBP13.14□□□□□ -0.31
CHD8-211ENST00000556833 KISS1RQ969F8 398 aaPredicted RBP13.14□□□□□ -0.31
CHD8-211ENST00000556833 ZNF524Q96C55 264 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 CCDC126Q96EE4 140 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 FAM120BQ96EK7 910 aaKnown RBP13.14□□□□□ -0.31
CHD8-211ENST00000556833 DNAJA3Q96EY1 480 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 REG4Q9BYZ8 158 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 TUBB1Q9H4B7 451 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 YAE1D1Q9NRH1 226 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 UBQLN4Q9NRR5 601 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 GLRX2Q9NS18 164 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 ZCCHC3Q9NUD5 404 aaKnown RBP13.14□□□□□ -0.31
CHD8-211ENST00000556833 PAQR5Q9NXK6 330 aaPredicted RBP13.14□□□□□ -0.31
CHD8-211ENST00000556833 KLHL13Q9P2N7 655 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 PRSS50Q9UI38 385 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 KCNE3Q9Y6H6 103 aa13.14□□□□□ -0.31
CHD8-211ENST00000556833 C7orf72A4D263 438 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 ZNF195O14628 629 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 PLIN3O60664 434 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 RAMP1O60894 148 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 IGHV4-39P01824 125 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 TP53P04637 393 aaPredicted RBP13.13□□□□□ -0.31
CHD8-211ENST00000556833 HMGN2P05204 90 aaKnown RBP13.13□□□□□ -0.31
CHD8-211ENST00000556833 NGFRP08138 427 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 ENPP1P22413 925 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 EDNRAP25101 427 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 TP53BP2Q13625 1128 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 NCMAPQ5T1S8 102 aa13.13□□□□□ -0.31
CHD8-211ENST00000556833 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.13□□□□□ -0.313e-6■■■□□ 16.4
CHD8-211ENST00000556833 SFRP5Q5T4F7 317 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms