RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SPDYE7PQ495Y7 208 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 P3H2Q8IVL5 708 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 LILRA2Q8N149 483 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 NATD1Q8N6N6 113 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 FNDC5Q8NAU1 212 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 PHOSPHO1Q8TCT1 267 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 OSTF1Q92882 214 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 C18orf12Q96KH6 178 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 MARK4Q96L34 752 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 PRPF18Q99633 342 aaKnown RBP20.23■□□□□ 0.83
ACTN1-220ENST00000556433 ACTRT3Q9BYD9 372 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 ROPN1BQ9BZX4 212 aaPredicted RBP20.23■□□□□ 0.83
ACTN1-220ENST00000556433 HOXD1Q9GZZ0 328 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 CXorf36Q9H7Y0 433 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 ROPN1Q9HAT0 212 aaPredicted RBP20.23■□□□□ 0.83
ACTN1-220ENST00000556433 GLRX2Q9NS18 164 aa20.23■□□□□ 0.83
ACTN1-220ENST00000556433 FAF1Q9UNN5 650 aaPredicted RBP20.23■□□□□ 0.83
ACTN1-220ENST00000556433 SKAP2O75563 359 aaPredicted RBP20.22■□□□□ 0.83
ACTN1-220ENST00000556433 C6orf47O95873 294 aa20.22■□□□□ 0.83
ACTN1-220ENST00000556433 LINGO3P0C6S8 592 aa20.22■□□□□ 0.83
ACTN1-220ENST00000556433 FPR1P21462 350 aa20.22■□□□□ 0.83
ACTN1-220ENST00000556433 EIF1P41567 113 aaKnown RBP20.22■□□□□ 0.83
ACTN1-220ENST00000556433 CARD18P57730 90 aa20.22■□□□□ 0.83
ACTN1-220ENST00000556433 VSNL1P62760 191 aa20.22■□□□□ 0.83
ACTN1-220ENST00000556433 MTERF4Q7Z6M4 381 aaKnown RBP20.22■□□□□ 0.83
ACTN1-220ENST00000556433 BIVMQ86UB2 503 aa20.22■□□□□ 0.83
ACTN1-220ENST00000556433 KRTCAP2Q8N6L1 136 aa20.22■□□□□ 0.83
ACTN1-220ENST00000556433 OR56A1Q8NGH5 318 aa20.22■□□□□ 0.83
ACTN1-220ENST00000556433 PSMA8Q8TAA3 256 aa20.22■□□□□ 0.83
ACTN1-220ENST00000556433 CAVIN3Q969G5 261 aa20.22■□□□□ 0.83
ACTN1-220ENST00000556433 COQ8BQ96D53 544 aa20.22■□□□□ 0.83
ACTN1-220ENST00000556433 HS3ST6Q96QI5 342 aa20.22■□□□□ 0.83
ACTN1-220ENST00000556433 PIP5K1AQ99755 562 aa20.22■□□□□ 0.83
ACTN1-220ENST00000556433 NPIPA5A0A0B4J1W7 369 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 NPIPA7E9PJI5 369 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 NPIPA8P0DM63 369 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 CREB1P16220 341 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 RNF144AP50876 292 aaPredicted RBP20.21■□□□□ 0.83
ACTN1-220ENST00000556433 ZNF117Q03924 483 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 KLHL26Q53HC5 615 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 GTF2IRD2BQ6EKJ0 949 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 STAC2Q6ZMT1 411 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 GTF2IRD2Q86UP8 949 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 ZNF527Q8NB42 609 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 TUBGCP3Q96CW5 907 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 KLHL15Q96M94 604 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 SMR3AQ99954 134 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 FANCFQ9NPI8 374 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 GPATCH2Q9NW75 528 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 KCNE3Q9Y6H6 103 aa20.21■□□□□ 0.83
ACTN1-220ENST00000556433 ARID1AO14497 2285 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 H3BNH8 94 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 CFLARO15519 480 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 OIP5O43482 229 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 SOX30O94993 753 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 NUDT14O95848 222 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 THBDP07204 575 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 BPGMP07738 259 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 KRT16P08779 473 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 INHBBP09529 407 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 PPP3CBP16298 524 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 PRPS1L1P21108 318 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 LOXP28300 417 aaPredicted RBP20.2■□□□□ 0.82
ACTN1-220ENST00000556433 ADSLP30566 484 aaPredicted RBP20.2■□□□□ 0.82
ACTN1-220ENST00000556433 SFTPDP35247 375 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 FOXF1Q12946 379 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 DCST2Q5T1A1 773 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 CBLN3Q6UW01 205 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 BEND4Q6ZU67 534 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 LRRC75A-AS1Q8N1F1 130 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 ROBO4Q8WZ75 1007 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 CCL19Q99731 98 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 CARD8Q9Y2G2 431 aa20.2■□□□□ 0.82
ACTN1-220ENST00000556433 NUP214P35658 2090 aaPredicted RBP20.2■□□□□ 0.82
ACTN1-220ENST00000556433 GTPBP1O00178 669 aaKnown RBP20.19■□□□□ 0.82
ACTN1-220ENST00000556433 ZNF195O14628 629 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 EFNA2O43921 213 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 SHC1P29353 583 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 P2RX1P51575 399 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 ATP12AP54707 1039 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 Q5PR19 223 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 C20orf204Q6ZNR8 217 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 STK32CQ86UX6 486 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 RIMKLAQ8IXN7 391 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 FBXO27Q8NI29 283 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 REXO5Q96IC2 774 aaKnown RBP20.19■□□□□ 0.82
ACTN1-220ENST00000556433 DUSP26Q9BV47 211 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 BHLHE41Q9C0J9 482 aaPredicted RBP20.19■□□□□ 0.82
ACTN1-220ENST00000556433 C12orf49Q9H741 205 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 ZNF395Q9H8N7 513 aaPredicted RBP20.19■□□□□ 0.82
ACTN1-220ENST00000556433 TIGARQ9NQ88 270 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 ICAM5Q9UMF0 924 aa20.19■□□□□ 0.82
ACTN1-220ENST00000556433 VPS13CQ709C8 3753 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 KLF4O43474 513 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 TUBBP07437 444 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 PABPC4LP0CB38 370 aaKnown RBP20.18■□□□□ 0.82
ACTN1-220ENST00000556433 G6PDP11413 515 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 ADH6P28332 368 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 BEX5Q5H9J7 111 aa20.18■□□□□ 0.82
ACTN1-220ENST00000556433 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms