RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 NDUFB2O95178 105 aa14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 ADH1BP00325 375 aa14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZNF20P17024 532 aa14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 ITGB7P26010 798 aa14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 NTHL1P78549 312 aa14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 GRK1Q15835 563 aa14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 PUS10Q3MIT2 529 aaKnown RBP14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 LEG1Q6P5S2 330 aa14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 VASH1Q7L8A9 365 aaPredicted RBP14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 ZNF619Q8N2I2 560 aa14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 MS4A8Q9BY19 250 aa14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 TAS2R8Q9NYW2 309 aa14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 COPS7AQ9UBW8 275 aa14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 NEU3Q9UQ49 428 aa14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 MEMO1Q9Y316 297 aa14.08□□□□□ -0.15
ARHGEF40-207ENST00000556399 MEN1O00255 615 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 SPDEFO95238 335 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 FRKP42685 505 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 TOMM20Q15388 145 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 NXNL2Q5VZ03 156 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 ACSM5Q6NUN0 579 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR56B4Q8NH76 319 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 TANKQ92844 425 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 TCRBP04435 133 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 SPARCP09486 303 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 PDE7AQ13946 482 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 PRICKLE2Q7Z3G6 844 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR4M1Q8NGD0 313 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 G6PC3Q9BUM1 346 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 GLIPR2Q9H4G4 154 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 IER3IP1Q9Y5U9 82 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 A0A0G2JMP0 313 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 NUPL2O15504 423 aaKnown RBP14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 CDC40O60508 579 aaKnown RBP eCLIP14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 TRIM23P36406 574 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 RPS21P63220 83 aaKnown RBP14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 MRPL58Q14197 206 aaKnown RBP14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 ZMYND11Q15326 602 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 FOXRED2Q8IWF2 684 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR2L3Q8NG85 312 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR4M2Q8NGB6 313 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR5AK2Q8NH90 309 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 PXYLP1Q8TE99 480 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 LYSMD1Q96S90 227 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 BCL2L14Q9BZR8 327 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 NOX3Q9HBY0 568 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 HHATLQ9HCP6 504 aa14.08□□□□□ -0.16
ARHGEF40-207ENST00000556399 C11orf98E9PRG8 122 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 SC5DO75845 299 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 PRKCAP17252 672 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 CST5P28325 142 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 GDI1P31150 447 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 BRIX1Q8TDN6 353 aaKnown RBP14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 ADAMTS14Q8WXS8 1223 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 KATNB1Q9BVA0 655 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 PPA2Q9H2U2 334 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 ADAM29Q9UKF5 820 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 SLC9B1P1A6NJY1 282 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 PDGFAP04085 211 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 ATP5A1P25705 553 aaKnown RBP14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 AGTR1P30556 359 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 HTR1FP30939 366 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 VIPR2P41587 438 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 ZNF584Q8IVC4 421 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 SYNPRQ8TBG9 265 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 ASB12Q8WXK4 309 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 DNAJA3Q96EY1 480 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 SLC38A3Q99624 504 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 HRASLS2Q9NWW9 162 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 TRAV18A0A075B6X5 111 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR6C74A6NCV1 312 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 A8MVJ9 347 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 PLPP1O14494 284 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 ZNF780AO75290 641 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 PRKRAO75569 313 aaKnown RBP14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 RLN2P04090 185 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 ZNF888P0CJ79 500 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 PGAM2P15259 253 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 SHC2P98077 582 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 GK2Q14410 553 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 ELP2Q6IA86 826 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 EIF5AL1Q6IS14 154 aaKnown RBP14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 KIAA1211LQ6NV74 962 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 OR2A14Q96R47 310 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 ZNF436Q9C0F3 470 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 TMEM14AQ9Y6G1 99 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 A0A1W2PQU0 124 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 ACOT7O00154 380 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 B4GALT3O60512 393 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 AIFM1O95831 613 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 PRH1P02810 166 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 INHBBP09529 407 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 TYRP1P17643 537 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 TCTN3Q6NUS6 607 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 CDRT4Q8N9R6 151 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 AMDHD1Q96NU7 426 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 ZNF350Q9GZX5 532 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 ASB6Q9NWX5 421 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 TMPRSS11EQ9UL52 423 aa14.07□□□□□ -0.16
ARHGEF40-207ENST00000556399 DHDHQ9UQ10 334 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms