RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 UBL4AP11441 157 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 ZNF17P17021 662 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 NCF2P19878 526 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-217ENST00000556203 P2RX1P51575 399 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 SUMO3P55854 103 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-217ENST00000556203 IRX1P78414 480 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-217ENST00000556203 GUCY1A3Q02108 690 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 HSPB2Q16082 182 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 PLPPR5Q32ZL2 321 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 PLXDC2Q6UX71 529 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 FRRS1Q6ZNA5 592 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 LIX1LQ8IVB5 337 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 ZNF619Q8N2I2 560 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 MEIOBQ8N635 442 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 TMCO5AQ8N6Q1 288 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 C9orf106Q8NAJ2 232 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 GTF2H4Q92759 462 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 ZBTB8AQ96BR9 441 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 SPDL1Q96EA4 605 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 AURKBQ96GD4 344 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-217ENST00000556203 NPAS1Q99742 590 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 TPT1P8Q9HAU6 139 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 FGFR1OP2Q9NVK5 253 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 TMEM45AQ9NWC5 275 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 ICAM5Q9UMF0 924 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 TRIM33Q9UPN9 1127 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 LIPT1Q9Y234 373 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 PCDHB14Q9Y5E9 798 aa13.72□□□□□ -0.21
ACTN1-217ENST00000556203 MBD3L4A6NDZ8 208 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-217ENST00000556203 MBD3L3A6NE82 208 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-217ENST00000556203 MBD3L5A6NJ08 208 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-217ENST00000556203 H0YC42 278 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 ZNF264O43296 627 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 CYP7B1O75881 506 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 H6PDO95479 791 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 NUDT14O95848 222 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 CHRM4P08173 479 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 VIMP08670 466 aaKnown RBP13.71□□□□□ -0.21
ACTN1-217ENST00000556203 CD1EP15812 388 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 CAPN3P20807 821 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 CEACAM8P31997 349 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-217ENST00000556203 CRATP43155 626 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 SUCLG1P53597 346 aaKnown RBP13.71□□□□□ -0.21
ACTN1-217ENST00000556203 MVDP53602 400 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 TPD52P55327 224 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-217ENST00000556203 CHRNEQ04844 493 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 MAPK14Q16539 360 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 SYPL1Q16563 259 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 CHMP1BQ7LBR1 199 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 HMGN2P46Q86SG4 172 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 ADGRE4PQ86SQ3 457 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 GTPBP8Q8N3Z3 284 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-217ENST00000556203 MBD3L2Q8NHZ7 208 aaPredicted RBP13.71□□□□□ -0.21
ACTN1-217ENST00000556203 RNF145Q96MT1 663 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 TRNT1Q96Q11 434 aaKnown RBP13.71□□□□□ -0.21
ACTN1-217ENST00000556203 PAIP1Q9H074 479 aaKnown RBP13.71□□□□□ -0.21
ACTN1-217ENST00000556203 SAP130Q9H0E3 1048 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 QRSL1Q9H0R6 528 aaKnown RBP13.71□□□□□ -0.21
ACTN1-217ENST00000556203 RABEP2Q9H5N1 569 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 KCNJ16Q9NPI9 418 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 L3MBTL1Q9Y468 752 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 AP4B1Q9Y6B7 739 aa13.71□□□□□ -0.21
ACTN1-217ENST00000556203 FREM3P0C091 2139 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 A0A096LPI6 279 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 C7orf72A4D263 438 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 HNRNPRO43390 633 aaKnown RBP13.7□□□□□ -0.22
ACTN1-217ENST00000556203 EIF4E2O60573 245 aaKnown RBP13.7□□□□□ -0.22
ACTN1-217ENST00000556203 CSTAP01040 98 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 SNRPB2P08579 225 aaKnown RBP13.7□□□□□ -0.22
ACTN1-217ENST00000556203 LINGO3P0C6S8 592 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 UBTFL6P0CB48 400 aaPredicted RBP13.7□□□□□ -0.22
ACTN1-217ENST00000556203 TROVE2P10155 538 aaKnown RBP eCLIP13.7□□□□□ -0.22
ACTN1-217ENST00000556203 NR2F1P10589 423 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 ETFAP13804 333 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 MAGEA8P43361 318 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 CCR4P51679 360 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 ZNF136P52737 540 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 CLDN15P56746 228 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 CLDN20P56880 219 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 EEFSECP57772 596 aaKnown RBP13.7□□□□□ -0.22
ACTN1-217ENST00000556203 SF3A3Q12874 501 aaKnown RBP eCLIP13.7□□□□□ -0.22
ACTN1-217ENST00000556203 FOXF1Q12946 379 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 GRAMD2AQ8IUY3 354 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 TOR1AIP2Q8NFQ8 470 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 OR5W2Q8NH69 310 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 POC1BQ8TC44 478 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 OIT3Q8WWZ8 545 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 WNT2BQ93097 391 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 ZG16BQ96DA0 208 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 UCN2Q96RP3 112 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 TMEM120AQ9BXJ8 343 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 LAT2Q9GZY6 243 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 ZNF385DQ9H6B1 395 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 SLC52A3Q9NQ40 469 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 CLCF1Q9UBD9 225 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 P2RX2Q9UBL9 471 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 MED12Q93074 2177 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 PCNX1Q96RV3 2341 aa13.7□□□□□ -0.22
ACTN1-217ENST00000556203 DVL2O14641 736 aa13.69□□□□□ -0.22
ACTN1-217ENST00000556203 BCAS1O75363 584 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms