RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 PAQR8Q8TEZ7 354 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 CANT1Q8WVQ1 401 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 PSMF1Q92530 271 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 PRRC1Q96M27 445 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 JSRP1Q96MG2 331 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-220ENST00000555634 ARHGDIGQ99819 225 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 BDH2Q9BUT1 245 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 TRIM2Q9C040 744 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 REEP1Q9H902 201 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 TMEM27Q9HBJ8 222 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 S100A14Q9HCY8 104 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 IL1RAPQ9NPH3 570 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 ARMC1Q9NVT9 282 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 C6orf203Q9P0P8 240 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-220ENST00000555634 DKKL1Q9UK85 242 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 SSUH2Q9Y2M2 353 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 CHCHD2Q9Y6H1 151 aaPredicted RBP10.26□□□□□ -0.77
SHMT2-220ENST00000555634 APC2O95996 2303 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 MED13Q9UHV7 2174 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 TRAV17A0A0B4J275 112 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 ANKRD33BA6NCL7 494 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 H0Y3Z8 333 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 M0R3H8 397 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 FADS1O60427 444 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 DPM1O60762 260 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 CEACAM4O75871 244 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 ZIC2O95409 532 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-220ENST00000555634 WDPCPO95876 746 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 CST1P01037 141 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 LINGO3P0C6S8 592 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 RHCEP18577 417 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 OR1E2P47887 323 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 P2RX1P51575 399 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 SPIBQ01892 262 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 MAPK14Q16539 360 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 NRF1Q16656 503 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 DUSP7Q16829 419 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.25□□□□□ -0.77
SHMT2-220ENST00000555634 LYPD8Q6UX82 237 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 RRM2BQ7LG56 351 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 MARCH3Q86UD3 253 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 CADM2Q8N3J6 435 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 OR1J4Q8NGS1 313 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 PHF10Q8WUB8 498 aaKnown RBP10.25□□□□□ -0.77
SHMT2-220ENST00000555634 DUS3LQ96G46 650 aaKnown RBP10.25□□□□□ -0.77
SHMT2-220ENST00000555634 SH3YL1Q96HL8 342 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-220ENST00000555634 TMEM41AQ96HV5 264 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 NODALQ96S42 347 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 MCHR1Q99705 422 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 PIP5K1AQ99755 562 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 FAM173AQ9BQD7 235 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 FNDC11Q9BVV2 318 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 CHID1Q9BWS9 393 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 LAT2Q9GZY6 243 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 DNAJB12Q9NXW2 375 aaKnown RBP10.25□□□□□ -0.77
SHMT2-220ENST00000555634 KIF17Q9P2E2 1029 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 TMCC3Q9ULS5 477 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 CARD8Q9Y2G2 431 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 ENPP4Q9Y6X5 453 aa10.25□□□□□ -0.77
SHMT2-220ENST00000555634 TNRC6AQ8NDV7 1962 aaKnown RBP10.25□□□□□ -0.77
SHMT2-220ENST00000555634 CHD6Q8TD26 2715 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 NCOR2Q9Y618 2525 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 ANKUB1A6NFN9 424 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 MAN1A2O60476 641 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 GCM2O75603 506 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-220ENST00000555634 KRT36O76013 467 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 CCL3P10147 92 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 THRBP10828 461 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 GP1BBP13224 206 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 RYKP34925 604 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 CD96P40200 585 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 CASP3P42574 277 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 MAGEA2P43356 314 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 HTR3AP46098 478 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 CRYBA2P53672 197 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 PLGLB1Q02325 96 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 ZNF117Q03924 483 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 ST3GAL3Q11203 375 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 SKP2Q13309 424 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 RIPK1Q13546 671 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 TOMM20Q15388 145 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 TAF11Q15544 211 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 COL28A1Q2UY09 1125 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 FGD3Q5JSP0 725 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 SWT1Q5T5J6 900 aaKnown RBP10.24□□□□□ -0.77
SHMT2-220ENST00000555634 WBP2NLQ6ICG8 309 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 OR2T5Q6IEZ7 315 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 ZNF613Q6PF04 617 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 PIWIL3Q7Z3Z3 882 aaKnown RBP10.24□□□□□ -0.77
SHMT2-220ENST00000555634 FAM86B1Q8N7N1 296 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 FAM71CQ8NEG0 241 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 GPR32P1Q8NGA4 272 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 OR10Q1Q8NGQ4 319 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 OR2T29Q8NH02 315 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 OR5W2Q8NH69 310 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 DNAJA4Q8WW22 397 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-220ENST00000555634 HAS2Q92819 552 aa10.24□□□□□ -0.77
SHMT2-220ENST00000555634 ZNF300Q96RE9 604 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-220ENST00000555634 SMAD5Q99717 465 aaKnown RBP10.24□□□□□ -0.77
SHMT2-220ENST00000555634 ANGPTL4Q9BY76 406 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms