RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 PAMR1Q6UXH9 720 aa12.4□□□□□ -0.42
PCNX4-209ENST00000555569 KIRREL3Q8IZU9 778 aa12.4□□□□□ -0.42
PCNX4-209ENST00000555569 OR10D3Q8NH80 312 aa12.4□□□□□ -0.42
PCNX4-209ENST00000555569 POC1BQ8TC44 478 aa12.4□□□□□ -0.42
PCNX4-209ENST00000555569 ADGRG7Q96K78 797 aa12.4□□□□□ -0.42
PCNX4-209ENST00000555569 OR7D2Q96RA2 312 aa12.4□□□□□ -0.42
PCNX4-209ENST00000555569 PRRG4Q9BZD6 226 aa12.4□□□□□ -0.42
PCNX4-209ENST00000555569 KCNK9Q9NPC2 374 aa12.4□□□□□ -0.42
PCNX4-209ENST00000555569 PAQR5Q9NXK6 330 aaPredicted RBP12.4□□□□□ -0.42
PCNX4-209ENST00000555569 TESMINQ9Y4I5 508 aa12.4□□□□□ -0.42
PCNX4-209ENST00000555569 ACTL7BQ9Y614 415 aa12.4□□□□□ -0.42
PCNX4-209ENST00000555569 H3BNH8 94 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 ADAMDEC1O15204 470 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 CXCL13O43927 109 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 CGAP01215 116 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 OPN1LWP04000 364 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 LINGO3P0C6S8 592 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 CD8BP10966 210 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 POU2F1P14859 743 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 BGNP21810 368 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 EIF1P41567 113 aaKnown RBP12.39□□□□□ -0.43
PCNX4-209ENST00000555569 SLC6A8P48029 635 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 ATP12AP54707 1039 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 SUMO3P55854 103 aaPredicted RBP12.39□□□□□ -0.43
PCNX4-209ENST00000555569 ZNF117Q03924 483 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 STX3Q13277 289 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 MPP2Q14168 576 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 CTU2Q2VPK5 515 aaKnown RBP12.39□□□□□ -0.43
PCNX4-209ENST00000555569 PDSS1Q5T2R2 415 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 ESPNLQ6ZVH7 1005 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 FAM214BQ7L5A3 538 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 CROCCP2Q86T23 111 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 CLECL1Q8IZS7 167 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 OR5D16Q8NGK9 328 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 OR2V1Q8NHB1 315 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 ZBTB9Q96C00 473 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 SORT1Q99523 831 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 SLC39A3Q9BRY0 314 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 DPY30Q9C005 99 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 TMEM185BQ9H7F4 350 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 PLEKHF2Q9H8W4 249 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 ELOVL5Q9NYP7 299 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 HAO1Q9UJM8 370 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 MCTS1Q9ULC4 181 aaKnown RBP12.39□□□□□ -0.43
PCNX4-209ENST00000555569 PROCRQ9UNN8 238 aa12.39□□□□□ -0.43
PCNX4-209ENST00000555569 MAP1AP78559 2803 aaPredicted RBP12.38□□□□□ -0.43
PCNX4-209ENST00000555569 UQCRHLA0A096LP55 91 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 A0A0J9YW62 118 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 NPIPB9F8W1W9 429 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 GTPBP1O00178 669 aaKnown RBP12.38□□□□□ -0.43
PCNX4-209ENST00000555569 RNASET2O00584 256 aaKnown RBP12.38□□□□□ -0.43
PCNX4-209ENST00000555569 TNFSF11O14788 317 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 OIP5O43482 229 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 SYNGR4O95473 234 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 NUDT14O95848 222 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 RAF1P04049 648 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 TUBBP07437 444 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 MATN1P21941 496 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 KCNJ5P48544 419 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 RNF144AP50876 292 aaPredicted RBP12.38□□□□□ -0.43
PCNX4-209ENST00000555569 P2RX1P51575 399 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 CTBP2P56545 445 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 RPS26P62854 115 aaKnown RBP12.38□□□□□ -0.43
PCNX4-209ENST00000555569 FOXF1Q12946 379 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCNX4-209ENST00000555569 HBMQ6B0K9 141 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 CBLN3Q6UW01 205 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 C6orf120Q7Z4R8 191 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 ZNF614Q8N883 585 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 ZNF610Q8N9Z0 462 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 CHDHQ8NE62 594 aaPredicted RBP12.38□□□□□ -0.43
PCNX4-209ENST00000555569 OR8J2Q8NGG1 315 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 OR4A15Q8NGL6 344 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 MBD6Q96DN6 1003 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 SLC35G5Q96KT7 338 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 KLHL15Q96M94 604 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 WFIKKN1Q96NZ8 548 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 SDF2Q99470 211 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 PAIP2Q9BPZ3 127 aaKnown RBP12.38□□□□□ -0.43
PCNX4-209ENST00000555569 NUF2Q9BZD4 464 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 PCDHGB4Q9UN71 923 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 CARD8Q9Y2G2 431 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 EMC9Q9Y3B6 208 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 DTNAQ9Y4J8 743 aa12.38□□□□□ -0.43
PCNX4-209ENST00000555569 ACANP16112 2415 aa12.37□□□□□ -0.43
PCNX4-209ENST00000555569 RNF103-CHMP3A0A140T963 221 aa12.37□□□□□ -0.43
PCNX4-209ENST00000555569 DUXAA6NLW8 204 aa12.37□□□□□ -0.43
PCNX4-209ENST00000555569 C16orf97H3BN30 126 aa12.37□□□□□ -0.43
PCNX4-209ENST00000555569 SS18L1O75177 396 aaPredicted RBP12.37□□□□□ -0.43
PCNX4-209ENST00000555569 ATE1O95260 518 aa12.37□□□□□ -0.43
PCNX4-209ENST00000555569 AK1P00568 194 aa12.37□□□□□ -0.43
PCNX4-209ENST00000555569 PLGP00747 810 aaPredicted RBP12.37□□□□□ -0.43
PCNX4-209ENST00000555569 LBPP18428 481 aa12.37□□□□□ -0.43
PCNX4-209ENST00000555569 IL11P20809 199 aa12.37□□□□□ -0.43
PCNX4-209ENST00000555569 ELK4P28324 431 aa12.37□□□□□ -0.43
PCNX4-209ENST00000555569 CCKARP32238 428 aa12.37□□□□□ -0.43
PCNX4-209ENST00000555569 SFTPDP35247 375 aa12.37□□□□□ -0.43
PCNX4-209ENST00000555569 UGT2B10P36537 528 aa12.37□□□□□ -0.43
PCNX4-209ENST00000555569 RIPPLY3P57055 190 aa12.37□□□□□ -0.43
PCNX4-209ENST00000555569 KEAP1Q14145 624 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms