RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 OR4K14Q8NGD5 310 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 OR1L3Q8NH93 324 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 ELMO1Q92556 727 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 SLCO2A1Q92959 643 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 DLX4Q92988 240 aaPredicted RBP4.42□□□□□ -1.7
VRK1-203ENST00000555067 PANX2Q96RD6 677 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 FUCA2Q9BTY2 467 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 RGCCQ9H4X1 137 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 NARFLQ9H6Q4 476 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 AZI2Q9H6S1 392 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 SIX2Q9NPC8 291 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 UBE2TQ9NPD8 197 aaPredicted RBP4.42□□□□□ -1.7
VRK1-203ENST00000555067 CHRAC1Q9NRG0 131 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 MRPL22Q9NWU5 206 aaKnown RBP4.42□□□□□ -1.7
VRK1-203ENST00000555067 AHSPQ9NZD4 102 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 PTTG3PQ9NZH4 202 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 ANAPC7Q9UJX3 599 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 PPP2R2CQ9Y2T4 447 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 STK36Q9NRP7 1315 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 LOC390937A0A1W2PQ73 354 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 NKX6-3A6NJ46 265 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 A8MU76 341 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 H7C423 109 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 ZNF701M0R085 212 aaPredicted RBP4.41□□□□□ -1.7
VRK1-203ENST00000555067 HAS3O00219 553 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 CETN3O15182 167 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 ANGPTL1O95841 491 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 IGSF6O95976 241 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 ALOX5P09917 674 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 HSMCR30P0CW71 290 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 ATP1B2P14415 290 aaPredicted RBP4.41□□□□□ -1.7
VRK1-203ENST00000555067 PRKACBP22694 351 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 AADACP22760 399 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 U2AF2P26368 475 aaKnown RBP eCLIP4.41□□□□□ -1.7
VRK1-203ENST00000555067 ID1P41134 155 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 BDKRB1P46663 353 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 OR3A2P47893 321 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 NDST2P52849 883 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 DSCR10P59022 87 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 OC90Q02509 493 aaPredicted RBP4.41□□□□□ -1.7
VRK1-203ENST00000555067 PEX6Q13608 980 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 ATXN7L3Q14CW9 347 aaPredicted RBP4.41□□□□□ -1.7
VRK1-203ENST00000555067 ZNF74Q16587 644 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 HAGHQ16775 308 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 TMEM52BQ4KMG9 183 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 LCE3EQ5T5B0 92 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 BTNL3Q6UXE8 466 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 LEKR1Q6ZMV7 388 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 SERPINA9Q86WD7 417 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 GVQW1Q8N7I0 195 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 OR13F1Q8NGS4 319 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 SUN5Q8TC36 379 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 GLYATL2Q8WU03 294 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 OMA1Q96E52 524 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 C12orf42Q96LP6 360 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 CPXM1Q96SM3 734 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 RBM4BQ9BQ04 359 aaKnown RBP4.41□□□□□ -1.7
VRK1-203ENST00000555067 RIOK1Q9BRS2 568 aaKnown RBP4.41□□□□□ -1.7
VRK1-203ENST00000555067 PAPOLGQ9BWT3 736 aaKnown RBP4.41□□□□□ -1.7
VRK1-203ENST00000555067 COMMD4Q9H0A8 199 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 IKZF5Q9H5V7 419 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 MTHFD2LQ9H903 347 aaPredicted RBP4.41□□□□□ -1.7
VRK1-203ENST00000555067 LZTFL1Q9NQ48 299 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 SLC17A5Q9NRA2 495 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 DUS2Q9NX74 493 aaKnown RBP4.41□□□□□ -1.7
VRK1-203ENST00000555067 PURGQ9UJV8 347 aaKnown RBP4.41□□□□□ -1.7
VRK1-203ENST00000555067 PITPNC1Q9UKF7 332 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 ABCG2Q9UNQ0 655 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 RHBDD3Q9Y3P4 386 aa4.41□□□□□ -1.7
VRK1-203ENST00000555067 CENPJQ9HC77 1338 aaPredicted RBP4.41□□□□□ -1.7
VRK1-203ENST00000555067 A0A1W2PPE3 182 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 OR5H15A6NDH6 313 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 ZNF840PA6NDX5 716 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 TCP10L2B9ZVM9 353 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 DLGAP1O14490 977 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 EI24O14681 340 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 YKT6O15498 198 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 RANBP6O60518 1105 aaKnown RBP4.4□□□□□ -1.71
VRK1-203ENST00000555067 N4BP1O75113 896 aaKnown RBP4.4□□□□□ -1.71
VRK1-203ENST00000555067 STX11O75558 287 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 H6PDO95479 791 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 TGM6O95932 706 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 OAS1P00973 400 aaKnown RBP4.4□□□□□ -1.71
VRK1-203ENST00000555067 TNNI1P19237 187 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 PGCP20142 388 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 MSR1P21757 451 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 SLC1A4P43007 532 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 BCAP31P51572 246 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 ASPHQ12797 758 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 ILKQ13418 452 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 CUL1Q13616 776 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 FFAR4Q5NUL3 377 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 RHBDD2Q6NTF9 364 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 HACD2Q6Y1H2 254 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 H2BFWTQ7Z2G1 175 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 TCAIMQ8N3R3 496 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 Q8N9G6 341 aaPredicted RBP4.4□□□□□ -1.71
VRK1-203ENST00000555067 CHDHQ8NE62 594 aaPredicted RBP4.4□□□□□ -1.71
VRK1-203ENST00000555067 OR1L6Q8NGR2 347 aa4.4□□□□□ -1.71
VRK1-203ENST00000555067 OR4C3Q8NH37 302 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms