RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 GCNT2Q8N0V5 402 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 METTL25Q8N6Q8 603 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 OR5M1Q8NGP8 315 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 B4GALNT2Q8NHY0 566 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 PHOSPHO1Q8TCT1 267 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 TESCQ96BS2 214 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 OR7D2Q96RA2 312 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 RBM24Q9BX46 236 aaKnown RBP7.86□□□□□ -1.15
ACTN1-213ENST00000554508 PINK1Q9BXM7 581 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 POLDIP3Q9BY77 421 aaKnown RBP7.86□□□□□ -1.15
ACTN1-213ENST00000554508 CCDC134Q9H6E4 229 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 NPHS2Q9NP85 383 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 RASSF1Q9NS23 344 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 FGFR1OP2Q9NVK5 253 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 DNAJB12Q9NXW2 375 aaKnown RBP7.86□□□□□ -1.15
ACTN1-213ENST00000554508 ITGB1BP2Q9UKP3 347 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 PACSIN3Q9UKS6 424 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 EDARQ9UNE0 448 aa7.86□□□□□ -1.15
ACTN1-213ENST00000554508 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 A0A0G2JND7 137 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 A0A1W2PNV4 684 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 A6NNC1 897 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 ANKRD28O15084 1053 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 SEC14L5O43304 696 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 GMFGO60234 142 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 EIF4E2O60573 245 aaKnown RBP7.85□□□□□ -1.15
ACTN1-213ENST00000554508 SCN2BO60939 215 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 TNFSF13O75888 250 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 TGDSO95455 350 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 AGR2O95994 175 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 TROVE2P10155 538 aaKnown RBP eCLIP7.85□□□□□ -1.15
ACTN1-213ENST00000554508 FCGR2AP12318 317 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 UQCRC2P22695 453 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 ME2P23368 584 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 PSMA4P25789 261 aaKnown RBP7.85□□□□□ -1.15
ACTN1-213ENST00000554508 ADH6P28332 368 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 SOAT1P35610 550 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 CPA2P48052 419 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 IDH3AP50213 366 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 P2RX1P51575 399 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 SF3A3Q12874 501 aaKnown RBP eCLIP7.85□□□□□ -1.156e-36■■■■□ 21.7
ACTN1-213ENST00000554508 SNTB1Q13884 538 aaKnown RBP7.85□□□□□ -1.15
ACTN1-213ENST00000554508 PLPPR5Q32ZL2 321 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 ARHGAP11BQ3KRB8 267 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 PDSS1Q5T2R2 415 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 OGFOD2Q6N063 350 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 EPGNQ6UW88 154 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 SPATA19Q7Z5L4 167 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 LUZP2Q86TE4 346 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 GGNQ86UU5 652 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 CLECL1Q8IZS7 167 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 GATSQ8NAP1 163 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 CHDHQ8NE62 594 aaPredicted RBP7.85□□□□□ -1.15
ACTN1-213ENST00000554508 OR4A15Q8NGL6 344 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 OR5AK3PQ8NH89 298 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 RFWD2Q8NHY2 731 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 MIPOL1Q8TD10 442 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 OIT3Q8WWZ8 545 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 SMPDL3BQ92485 455 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 FIG4Q92562 907 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 STARD4Q96DR4 205 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 OTUB1Q96FW1 271 aaPredicted RBP7.85□□□□□ -1.15
ACTN1-213ENST00000554508 SH3YL1Q96HL8 342 aaPredicted RBP7.85□□□□□ -1.15
ACTN1-213ENST00000554508 SLC35G5Q96KT7 338 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 DACH2Q96NX9 599 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 OR52B2Q96RD2 323 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 SDF2Q99470 211 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 EBF4Q9BQW3 602 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 PRRG4Q9BZD6 226 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 RNF122Q9H9V4 155 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 TCF7L2Q9NQB0 619 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 MED17Q9NVC6 651 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 EXD2Q9NVH0 621 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 ELOVL5Q9NYP7 299 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 NDRG3Q9UGV2 375 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 DCTN4Q9UJW0 460 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 DTNAQ9Y4J8 743 aa7.85□□□□□ -1.15
ACTN1-213ENST00000554508 FREM1Q5H8C1 2179 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 F8P00451 2351 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 RNF103-CHMP3A0A140T963 221 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 SHISA8B8ZZ34 492 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 NPIPB9F8W1W9 429 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 H0YC42 278 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 GTPBP1O00178 669 aaKnown RBP7.84□□□□□ -1.15
ACTN1-213ENST00000554508 EIF1AYO14602 144 aaKnown RBP7.84□□□□□ -1.15
ACTN1-213ENST00000554508 ADAMDEC1O15204 470 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 UBDO15205 165 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 STX11O75558 287 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 CPSF4O95639 269 aaKnown RBP7.84□□□□□ -1.15
ACTN1-213ENST00000554508 GUSBP08236 651 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 LINGO3P0C6S8 592 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 CD8BP10966 210 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 ELK4P28324 431 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 DNAJA1P31689 397 aaKnown RBP7.84□□□□□ -1.15
ACTN1-213ENST00000554508 S100A3P33764 101 aa7.84□□□□□ -1.15
ACTN1-213ENST00000554508 KIR2DL2P43627 348 aaPredicted RBP7.84□□□□□ -1.15
ACTN1-213ENST00000554508 EIF1AXP47813 144 aaKnown RBP7.84□□□□□ -1.15
ACTN1-213ENST00000554508 TPD52P55327 224 aaPredicted RBP7.84□□□□□ -1.15
ACTN1-213ENST00000554508 SUMO3P55854 103 aaPredicted RBP7.84□□□□□ -1.15
ACTN1-213ENST00000554508 NME5P56597 212 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms