RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ZNF107Q9UII5 783 aaPredicted RBP3.9□□□□□ -1.79
SCFD1-211ENST00000554437 CDH9Q9ULB4 789 aa3.9□□□□□ -1.79
SCFD1-211ENST00000554437 FGD5Q6ZNL6 1462 aa3.9□□□□□ -1.79
SCFD1-211ENST00000554437 RAD54L2Q9Y4B4 1467 aa3.9□□□□□ -1.79
SCFD1-211ENST00000554437 IGLV3-10A0A075B6K4 115 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 RNF222A6NCQ9 220 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 BTBD17A6NE02 478 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 YJEFN3A6XGL0 299 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 FOXI3A8MTJ6 420 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-211ENST00000554437 RNF212BA8MTL3 300 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 SUPT3HB4E1H0 165 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 CLDN5O00501 218 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 PHOX2AO14813 284 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 AKR7A2O43488 359 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 RNF13O43567 381 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 ANP32DO95626 131 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 TXNDC12O95881 172 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 CSTAP01040 98 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 CHRNA1P02708 482 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 MBL2P11226 248 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-211ENST00000554437 PRKACBP22694 351 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 CALML3P27482 149 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 CD1BP29016 333 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 PPP2R1BP30154 601 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 NMT1P30419 496 aaKnown RBP3.89□□□□□ -1.79
SCFD1-211ENST00000554437 NOVP48745 357 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 RPL34P49207 117 aaKnown RBP3.89□□□□□ -1.79
SCFD1-211ENST00000554437 CDH4P55283 916 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 LIPEQ05469 1076 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 PJVKQ0ZLH3 352 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 CUL1Q13616 776 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 EXOSC7Q15024 291 aaKnown RBP3.89□□□□□ -1.79
SCFD1-211ENST00000554437 KLHL40Q2TBA0 621 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 C10orf120Q5SQS8 335 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 RNLSQ5VYX0 342 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 CENPQQ7L2Z9 268 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-211ENST00000554437 ITIH5Q86UX2 942 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 VPS36Q86VN1 386 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 SPATA24Q86W54 205 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 KATNAL2Q8IYT4 538 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 PARP8Q8N3A8 854 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 CHDHQ8NE62 594 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-211ENST00000554437 OR9A1PQ8NGU1 263 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 FAM81AQ8TBF8 368 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 PNPLA2Q96AD5 504 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 EFHD2Q96C19 240 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-211ENST00000554437 COQ2Q96H96 371 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 BPIFA3Q9BQP9 254 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 CHRDL1Q9BU40 450 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 ROPN1BQ9BZX4 212 aaPredicted RBP3.89□□□□□ -1.79
SCFD1-211ENST00000554437 SLC26A1Q9H2B4 701 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 AUNIPQ9H7T9 357 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 ELOVL3Q9HB03 270 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 SLC25A19Q9HC21 320 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 ZFP14Q9HCL3 533 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 AGPAT3Q9NRZ7 376 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 TAS2R16Q9NYV7 291 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 TP53TG3Q9ULZ0 132 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 MAP3K19Q56UN5 1328 aa3.89□□□□□ -1.79
SCFD1-211ENST00000554437 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 OR2AG2A6NM03 316 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 E9PMD0 336 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 SGK494L7N484 410 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 FOXE1O00358 373 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-211ENST00000554437 ABCD4O14678 606 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 ARPC1BO15143 372 aaKnown RBP3.88□□□□□ -1.79
SCFD1-211ENST00000554437 YKT6O15498 198 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 OR1F1O43749 312 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 JAK2O60674 1132 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 NEBLO76041 1014 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 NDUFA7O95182 113 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 YEATS4O95619 227 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 GOT2P00505 430 aaKnown RBP3.88□□□□□ -1.79
SCFD1-211ENST00000554437 FCGR3AP08637 254 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 HSD17B1P14061 328 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 PSMA2P25787 234 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 BRCC3P46736 316 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 STARP49675 285 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 CLDN8P56748 225 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 SEC61GP60059 68 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 IRX3P78415 501 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-211ENST00000554437 MAB21L1Q13394 359 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 EXOSC2Q13868 293 aaKnown RBP3.88□□□□□ -1.79
SCFD1-211ENST00000554437 CRMP1Q14194 572 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 CAMK4Q16566 473 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 MAPK6Q16659 721 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 ZSWIM7Q19AV6 140 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 ZNF528Q3MIS6 628 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 UNC50Q53HI1 259 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 RTL6Q6ICC9 239 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 WASH2PQ6VEQ5 465 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 RELL2Q8NC24 303 aaPredicted RBP3.88□□□□□ -1.79
SCFD1-211ENST00000554437 OR6T1Q8NGN1 323 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 OR4F5Q8NH21 305 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 KCNG3Q8TAE7 436 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 FBXO25Q8TCJ0 367 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 TSEN15Q8WW01 171 aaKnown RBP3.88□□□□□ -1.79
SCFD1-211ENST00000554437 HAVCR1Q96D42 359 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 DEFB118Q96PH6 123 aa3.88□□□□□ -1.79
SCFD1-211ENST00000554437 TESK2Q96S53 571 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms