RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 ZNF175Q9Y473 711 aa6.79□□□□□ -1.32
LINC00640-201ENST00000554409 KCNE3Q9Y6H6 103 aa6.79□□□□□ -1.32
LINC00640-201ENST00000554409 MED12Q93074 2177 aa6.79□□□□□ -1.32
LINC00640-201ENST00000554409 PKDREJQ9NTG1 2253 aa6.79□□□□□ -1.32
LINC00640-201ENST00000554409 INTS1Q8N201 2190 aaKnown RBP6.78□□□□□ -1.32
LINC00640-201ENST00000554409 SLC22A20A6NK97 555 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 HMGB1P1B2RPK0 211 aaPredicted RBP6.78□□□□□ -1.32
LINC00640-201ENST00000554409 H3BML4 177 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 H3BNH8 94 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 AGR2O95994 175 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 IL6P05231 212 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 PGRP06401 933 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 LINGO3P0C6S8 592 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 KITP10721 976 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 IDO1P14902 403 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 H2AFXP16104 143 aaPredicted RBP6.78□□□□□ -1.32
LINC00640-201ENST00000554409 CAPN3P20807 821 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 TCEA1P23193 301 aaKnown RBP6.78□□□□□ -1.32
LINC00640-201ENST00000554409 ELK4P28324 431 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 MRPL19P49406 292 aaKnown RBP6.78□□□□□ -1.32
LINC00640-201ENST00000554409 PCYT1AP49585 367 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 P2RX1P51575 399 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 ZNF41P51814 821 aaPredicted RBP6.78□□□□□ -1.32
LINC00640-201ENST00000554409 DGKQP52824 942 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 SUCLG1P53597 346 aaKnown RBP6.78□□□□□ -1.32
LINC00640-201ENST00000554409 UFM1P61960 85 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 RPS26P62854 115 aaKnown RBP6.78□□□□□ -1.32
LINC00640-201ENST00000554409 SORDQ00796 357 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 TLE4Q04727 773 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 ZNF141Q15928 474 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 GSTA3Q16772 222 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 FLYWCH1Q4VC44 716 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 SLC9B1Q4ZJI4 515 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 TTMPQ5BVD1 217 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.78□□□□□ -1.32
LINC00640-201ENST00000554409 OR2A2Q6IF42 318 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 MSANTD1Q6ZTZ1 278 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 CHMP1BQ7LBR1 199 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 HDXQ7Z353 690 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 GGNQ86UU5 652 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 ANKRD46Q86W74 232 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 GRAMD2AQ8IUY3 354 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 UBQLNLQ8IYU4 475 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 CLEC4FQ8N1N0 589 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 TRIML2Q8N7C3 387 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 GATSQ8NAP1 163 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 TOR1AIP2Q8NFQ8 470 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 NEURL3Q96EH8 262 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 ADGRG7Q96K78 797 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 LURAP1Q96LR2 239 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 ZBTB18Q99592 522 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 SLC35A5Q9BS91 424 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 SAP130Q9H0E3 1048 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 OR51I1Q9H343 314 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 PIGMQ9H3S5 423 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 SDR39U1Q9NRG7 319 aaPredicted RBP6.78□□□□□ -1.32
LINC00640-201ENST00000554409 MED17Q9NVC6 651 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 EXD2Q9NVH0 621 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 ARGLU1Q9NWB6 273 aaPredicted RBP6.78□□□□□ -1.32
LINC00640-201ENST00000554409 PAQR5Q9NXK6 330 aaPredicted RBP6.78□□□□□ -1.32
LINC00640-201ENST00000554409 ZIM2Q9NZV7 527 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 ICAM5Q9UMF0 924 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 VDAC3Q9Y277 283 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 DTNAQ9Y4J8 743 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 ITPR2Q14571 2701 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 CELSR2Q9HCU4 2923 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 CRYBG3Q68DQ2 2970 aa6.78□□□□□ -1.32
LINC00640-201ENST00000554409 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 NPIPA5A0A0B4J1W7 369 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 A0A1W2PNV4 684 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 CCDC154A6NI56 674 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 SHISA8B8ZZ34 492 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 NPIPA7E9PJI5 369 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 H0YC42 278 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 ETV2O00321 342 aaPredicted RBP6.77□□□□□ -1.33
LINC00640-201ENST00000554409 GMFGO60234 142 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 KIAA0513O60268 411 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 EIF4E2O60573 245 aaKnown RBP6.77□□□□□ -1.33
LINC00640-201ENST00000554409 DNAJA2O60884 412 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 STX11O75558 287 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 SLC22A3O75751 556 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 UGT2B17O75795 530 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 TNFSF13O75888 250 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 TGDSO95455 350 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 CPSF4O95639 269 aaKnown RBP6.77□□□□□ -1.33
LINC00640-201ENST00000554409 TGM6O95932 706 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 NPIPA8P0DM63 369 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 FCGR2AP12318 317 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 ADH6P28332 368 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 UQCRC1P31930 480 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 CHI3L1P36222 383 aaPredicted RBP6.77□□□□□ -1.33
LINC00640-201ENST00000554409 EIF1P41567 113 aaKnown RBP6.77□□□□□ -1.33
LINC00640-201ENST00000554409 MAGEA8P43361 318 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 KHKP50053 298 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 RNF144AP50876 292 aaPredicted RBP6.77□□□□□ -1.33
LINC00640-201ENST00000554409 TPD52P55327 224 aaPredicted RBP6.77□□□□□ -1.33
LINC00640-201ENST00000554409 NME5P56597 212 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 CLDN20P56880 219 aa6.77□□□□□ -1.33
LINC00640-201ENST00000554409 RPS3AP61247 264 aaKnown RBP6.77□□□□□ -1.33
LINC00640-201ENST00000554409 RAC1P63000 192 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms