RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 TMEM102Q8N9M5 508 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-208ENST00000553868 M1APQ8TC57 530 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 ITLN2Q8WWU7 325 aaPredicted RBP13.29□□□□□ -0.28
SHMT2-208ENST00000553868 ADIPOR1Q96A54 375 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 C8orf44Q96CB5 159 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 C8orf4Q9NR00 106 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 MKLN1Q9UL63 735 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 SH3GLB1Q9Y371 365 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 PCDHGA10Q9Y5H3 936 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 HS3ST3B1Q9Y662 390 aa13.29□□□□□ -0.28
SHMT2-208ENST00000553868 IGHV1-45A0A0A0MS14 117 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 NSG1A0A0A6YYJ2 146 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 TRBV11-1A0A0K0K1C0 115 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 HS6ST1O60243 411 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 IL33O95760 270 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 MT-ND1P03886 318 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 ICAM2P13598 275 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 RFX3P48380 749 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 NNATQ16517 81 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 DUSP7Q16829 419 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 BTBD16Q32M84 506 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 PLAG1Q6DJT9 500 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 NDUFAF7Q7L592 441 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 AMIGO2Q86SJ2 522 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 LILRA2Q8N149 483 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 BCORP1Q8N888 145 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 ZNF527Q8NB42 609 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 APCDD1LQ8NCL9 501 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 OR10Q1Q8NGQ4 319 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 ADAMTS17Q8TE56 1095 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 NR4A3Q92570 626 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 EME1Q96AY2 570 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 SDCCAG3Q96C92 435 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 IP6K3Q96PC2 410 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 NXF5Q9H1B4 397 aaKnown RBP13.28□□□□□ -0.28
SHMT2-208ENST00000553868 ZNF443Q9Y2A4 671 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-208ENST00000553868 KLF2Q9Y5W3 355 aaPredicted RBP13.28□□□□□ -0.28
SHMT2-208ENST00000553868 SEC16AO15027 2179 aa13.28□□□□□ -0.28
SHMT2-208ENST00000553868 hCG_2039718K7EN88 272 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 PEX12O00623 359 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 ADAMDEC1O15204 470 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 PEX1O43933 1283 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 LGI1O95970 557 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 HPP00738 406 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 COX6A1P12074 109 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 CD99P14209 185 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 NID1P14543 1247 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 RPS4Y1P22090 263 aaKnown RBP13.27□□□□□ -0.29
SHMT2-208ENST00000553868 IL12BP29460 328 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 OTX2P32243 289 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 IFNA8P32881 189 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 NR0B1P51843 470 aaKnown RBP13.27□□□□□ -0.29
SHMT2-208ENST00000553868 ARHGDIAP52565 204 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 ATP12AP54707 1039 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 VLDLRP98155 873 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 PLCXD2Q0VAA5 305 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 GK3PQ14409 553 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 OR2T5Q6IEZ7 315 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 OLIG3Q7RTU3 272 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 CARM1Q86X55 608 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 CMIPQ8IY22 773 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 KBTBD2Q8IY47 623 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 SVOPLQ8N434 492 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 ZNF441Q8N8Z8 693 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 GPR32P1Q8NGA4 272 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 OR11G2Q8NGC1 345 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 OR4N2Q8NGD1 307 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 OR2T29Q8NH02 315 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 C7orf34Q96L11 122 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 C9orf16Q9BUW7 83 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 TMUB1Q9BVT8 246 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 DEFB126Q9BYW3 111 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 KLHL4Q9C0H6 718 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 GSX1Q9H4S2 264 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-208ENST00000553868 MMP25Q9NPA2 562 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-208ENST00000553868 ENPP4Q9Y6X5 453 aa13.27□□□□□ -0.29
SHMT2-208ENST00000553868 MAP1AP78559 2803 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-208ENST00000553868 TMEM229AB2RXF0 380 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 SOCS6O14544 535 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 ABCB7O75027 752 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 E2F6O75461 281 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 REM1O75628 298 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 PRSS23O95084 383 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 HPGDP15428 266 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 RHCEP18577 417 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 ENDOUP21128 410 aaKnown RBP13.26□□□□□ -0.29
SHMT2-208ENST00000553868 TMED10P49755 219 aaKnown RBP13.26□□□□□ -0.29
SHMT2-208ENST00000553868 SMIM11AP58511 58 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 EFR3AQ14156 821 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 ZNF141Q15928 474 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 GRAMD1BQ3KR37 738 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 OGFRL1Q5TC84 451 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-208ENST00000553868 RNF220Q5VTB9 566 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 HMBOX1Q6NT76 420 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 KIRREL2Q6UWL6 708 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 PPP1R32Q7Z5V6 425 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 VRK2Q86Y07 508 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 ICA1LQ8NDH6 482 aa13.26□□□□□ -0.29
SHMT2-208ENST00000553868 SLC22A8Q8TCC7 542 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms