RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 SPRP35270 261 aaPredicted RBP7.94□□□□□ -1.14
PRKCH-208ENST00000553846 PRIM2P49643 509 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 FABP6P51161 128 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 ZNF83P51522 516 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 CCNG1P51959 295 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 CDH15P55291 814 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 IFT88Q13099 833 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 ACAP2Q15057 778 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 TRADDQ15628 312 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 GLE1Q53GS7 698 aaKnown RBP7.94□□□□□ -1.14
PRKCH-208ENST00000553846 SGO1Q5FBB7 561 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 ARL13AQ5H913 290 aaPredicted RBP7.94□□□□□ -1.14
PRKCH-208ENST00000553846 TCHHL1Q5QJ38 904 aaPredicted RBP7.94□□□□□ -1.14
PRKCH-208ENST00000553846 SH2D4BQ5SQS7 431 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 GRTP1Q5TC63 336 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 GALNT18Q6P9A2 607 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 TMEM107Q6UX40 140 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 RPS27LQ71UM5 84 aaKnown RBP7.94□□□□□ -1.14
PRKCH-208ENST00000553846 SLC43A2Q8N370 569 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 PTGR2Q8N8N7 351 aaPredicted RBP7.94□□□□□ -1.14
PRKCH-208ENST00000553846 WDR31Q8NA23 367 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 SPC24Q8NBT2 197 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 FAM216AQ8WUB2 273 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 HPS1Q92902 700 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 MUCL1Q96DR8 90 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 ZNF300Q96RE9 604 aaPredicted RBP7.94□□□□□ -1.14
PRKCH-208ENST00000553846 SHCBP1LQ9BZQ2 653 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 Q9N2J8 555 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 TAS2R7Q9NYW3 318 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 RNF14Q9UBS8 474 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 TMEFF2Q9UIK5 374 aaPredicted RBP7.94□□□□□ -1.14
PRKCH-208ENST00000553846 RYR3Q15413 4870 aa7.94□□□□□ -1.14
PRKCH-208ENST00000553846 IGKV3D-15A0A087WSY6 115 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 IGHV3-15A0A0B4J1V0 119 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 ZNF724A8MTY0 619 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 NKX2-2O95096 273 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 KLHL2O95198 593 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 IGFBP1P08833 259 aaPredicted RBP7.93□□□□□ -1.14
PRKCH-208ENST00000553846 ME2P23368 584 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 FOXG1P55316 489 aaPredicted RBP7.93□□□□□ -1.14
PRKCH-208ENST00000553846 DEFA6Q01524 100 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 SLC29A2Q14542 456 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 FAM83EQ2M2I3 478 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 ABLIM2Q6H8Q1 611 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 RAPH1Q70E73 1250 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 CCDC91Q7Z6B0 441 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 PLD6Q8N2A8 252 aaKnown RBP7.93□□□□□ -1.14
PRKCH-208ENST00000553846 C3orf56Q8N813 242 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 CEP112Q8N8E3 955 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 GATSQ8NAP1 163 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 OR52N5Q8NH56 324 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 ZNF483Q8TF39 744 aaPredicted RBP7.93□□□□□ -1.14
PRKCH-208ENST00000553846 ZFP90Q8TF47 636 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 C16orf78Q8WTQ4 265 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 PIK3R3Q92569 461 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 CDKL2Q92772 493 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 C3orf49Q96BT1 292 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 ELP4Q96EB1 424 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 GIMAP5Q96F15 307 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 MRGPRX4Q96LA9 322 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 AMDHD1Q96NU7 426 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 MUS81Q96NY9 551 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 C1QTNF3Q9BXJ4 246 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 ACPTQ9BZG2 426 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 GLIPR2Q9H4G4 154 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 ELOVL6Q9H5J4 265 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 MYOZ1Q9NP98 299 aaPredicted RBP7.93□□□□□ -1.14
PRKCH-208ENST00000553846 SIRT5Q9NXA8 310 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 KLHL9Q9P2J3 617 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 TXNDC16Q9P2K2 825 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 VPS29Q9UBQ0 182 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 MALT1Q9UDY8 824 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 SNX12Q9UMY4 172 aa7.93□□□□□ -1.14
PRKCH-208ENST00000553846 A0A1W2PQD3 144 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 ATP6V1G2-DDX39BF2Z307 99 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 KIF2AO00139 706 aaPredicted RBP7.92□□□□□ -1.14
PRKCH-208ENST00000553846 NDUFB5O43674 189 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 PCDH7O60245 1069 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 RAD51DO75771 328 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 H6PDO95479 791 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 JUNP05412 331 aaKnown RBP7.92□□□□□ -1.14
PRKCH-208ENST00000553846 ITGA5P08648 1049 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 SBK3P0C264 359 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 HSD3B1P14060 373 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 DDCP20711 480 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 HSD3B2P26439 372 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 TYK2P29597 1187 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 TIA1P31483 386 aaKnown RBP eCLIP7.92□□□□□ -1.14
PRKCH-208ENST00000553846 APOBEC3AP31941 199 aaPredicted RBP7.92□□□□□ -1.14
PRKCH-208ENST00000553846 MPIP34949 423 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 EIF1P41567 113 aaKnown RBP7.92□□□□□ -1.14
PRKCH-208ENST00000553846 MAGEA12P43365 314 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 CLK3P49761 638 aaKnown RBP7.92□□□□□ -1.14
PRKCH-208ENST00000553846 ZNF41P51814 821 aaPredicted RBP7.92□□□□□ -1.14
PRKCH-208ENST00000553846 DVL1P1P54792 670 aaPredicted RBP7.92□□□□□ -1.14
PRKCH-208ENST00000553846 PSMD4P55036 377 aaKnown RBP7.92□□□□□ -1.14
PRKCH-208ENST00000553846 HILS1P60008 231 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 RAC3P60763 192 aa7.92□□□□□ -1.14
PRKCH-208ENST00000553846 PHC1P78364 1004 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms