RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 GARNL3Q5VVW2 1013 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 ZNF322Q6U7Q0 402 aaPredicted RBP11.98□□□□□ -0.49
SHMT2-205ENST00000553474 KIAA1324Q6UXG2 1013 aaKnown RBP11.98□□□□□ -0.49
SHMT2-205ENST00000553474 MEPCEQ7L2J0 689 aaKnown RBP11.98□□□□□ -0.49
SHMT2-205ENST00000553474 BMP8AQ7Z5Y6 402 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 ABI3BPQ7Z7G0 1075 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 RAB43Q86YS6 212 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 GPALPP1Q8IXQ4 340 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 UBQLNLQ8IYU4 475 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 CACTIN-AS1Q8N1I8 211 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 OR10G6Q8NH81 332 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 SLC2A12Q8TD20 617 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 TMEM203Q969S6 136 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 SHDQ96IW2 340 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 SAMD8Q96LT4 415 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 TMEM27Q9HBJ8 222 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 CMC2Q9NRP2 79 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 C14orf119Q9NWQ9 140 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 MAT2BQ9NZL9 334 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 MED31Q9Y3C7 131 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 TECTAO75443 2155 aa11.98□□□□□ -0.49
SHMT2-205ENST00000553474 SHISA7A6NL88 538 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 CDC42EP2O14613 210 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 CASKO14936 926 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 POLR1CO15160 346 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-205ENST00000553474 TPD52L2O43399 206 aaKnown RBP11.97□□□□□ -0.49
SHMT2-205ENST00000553474 FGF17O60258 216 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 TMCC2O75069 709 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 CH25HO95992 272 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 SPNP16150 400 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 NT5EP21589 574 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 DRD5P21918 477 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 HTR3AP46098 478 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 CCR5P51681 352 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 TAS2R43P59537 309 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 TCEA2Q15560 299 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 NIPAL3Q6P499 406 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 ZNF517Q6ZMY9 492 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-205ENST00000553474 NRARPQ7Z6K4 114 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 LHFPL3Q86UP9 236 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 CPOQ8IVL8 374 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 OR4N5Q8IXE1 308 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 CA13Q8N1Q1 262 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 CSNK1A1LQ8N752 337 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 OR4F15Q8NGB8 312 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 FAM174AQ8TBP5 190 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 ADAMTS18Q8TE60 1221 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 MIXL1Q9H2W2 232 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 HINT3Q9NQE9 182 aaKnown RBP11.97□□□□□ -0.49
SHMT2-205ENST00000553474 MRPS17Q9Y2R5 130 aaKnown RBP11.97□□□□□ -0.49
SHMT2-205ENST00000553474 LOC105369274A0A096LPK9 316 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 LOC102723532A0A0G2JNH3 316 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 CHP2O43745 196 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 ZGLP1P0C6A0 271 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 CELP19835 753 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 F8A1P23610 371 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 HTR2AP28223 471 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 HOXC5Q00444 222 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 MGAT2Q10469 447 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 POU4F2Q12837 409 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 GAS6Q14393 721 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 KCNJ8Q15842 424 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 BAK1Q16611 211 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 AMZ1Q400G9 498 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 SMARCD3Q6STE5 483 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 Q6ZS52 159 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 Q6ZSR6 202 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 GALNT12Q8IXK2 581 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 OR4N4Q8N0Y3 316 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 AVL9Q8NBF6 648 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 NEIL3Q8TAT5 605 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 TM9SF2Q99805 663 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 ARPC5LQ9BPX5 153 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 TRIM36Q9NQ86 728 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 SACM1LQ9NTJ5 587 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 HRASLS2Q9NWW9 162 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 TOR4AQ9NXH8 423 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 HAO2Q9NYQ3 351 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 SLC35A3Q9Y2D2 325 aa11.97□□□□□ -0.49
SHMT2-205ENST00000553474 A0A1W2PQ09 198 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 HTR3EA5X5Y0 456 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 GABRPO00591 440 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 PIP5K1CO60331 668 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 SLC19A2O60779 497 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 CCNKO75909 580 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 LYPD3O95274 346 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 SEMA4FO95754 770 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 PDGFBP01127 241 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-205ENST00000553474 IGLV3-19P01714 112 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 KRT8P05787 483 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 IFI30P13284 250 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 TBXA2RP21731 343 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 MTNR1BP49286 362 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 ACTC1P68032 377 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 ACTA1P68133 377 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 SIGLEC14Q08ET2 396 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 CCINQ13939 588 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 GALEQ14376 348 aa11.96□□□□□ -0.49
SHMT2-205ENST00000553474 ZNHIT3Q15649 155 aaPredicted RBP11.96□□□□□ -0.49
SHMT2-205ENST00000553474 MAPK14Q16539 360 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms