RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 CARD18P57730 90 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 PTGR1Q14914 329 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 GUSBP1Q15486 140 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 ACKR1Q16570 336 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 CCNJQ5T5M9 372 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 IL23RQ5VWK5 629 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 CDC73Q6P1J9 531 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 C20orf204Q6ZNR8 217 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 ZCCHC23Q6ZST2 131 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 BEND4Q6ZU67 534 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 ZNF550Q7Z398 422 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 ZAR1Q86SH2 424 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 LILRA2Q8N149 483 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 LRRC75A-AS1Q8N1F1 130 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 SFXN5Q8TD22 340 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 CDS1Q92903 461 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 ARL8AQ96BM9 186 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 TUBGCP3Q96CW5 907 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 OTUB1Q96FW1 271 aaPredicted RBP11.43□□□□□ -0.58
LINC00643-202ENST00000553426 C18orf12Q96KH6 178 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 KLHL15Q96M94 604 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 CCL19Q99731 98 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 C1orf50Q9BV19 199 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 TMEM185BQ9H7F4 350 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 DLL4Q9NR61 685 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 FBXO34Q9NWN3 711 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 LGALS13Q9UHV8 139 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 CLEC4AQ9UMR7 237 aa11.43□□□□□ -0.58
LINC00643-202ENST00000553426 FAM171A2A8MVW0 826 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 SKAP2O75563 359 aaPredicted RBP11.42□□□□□ -0.58
LINC00643-202ENST00000553426 OPN1LWP04000 364 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 TUBBP07437 444 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 IL11P20809 199 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 CCKARP32238 428 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 SFTPDP35247 375 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 SLC6A8P48029 635 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 P2RX1P51575 399 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 XKR7Q5GH72 579 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 BEX5Q5H9J7 111 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 TMEM201Q5SNT2 666 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 C6orf136Q5SQH8 315 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 DCST2Q5T1A1 773 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 ANKRD34AQ69YU3 496 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 ZNF614Q8N883 585 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 PSMA8Q8TAA3 256 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 OSTF1Q92882 214 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 ADGRG7Q96K78 797 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 BHLHE41Q9C0J9 482 aaPredicted RBP11.42□□□□□ -0.58
LINC00643-202ENST00000553426 ZNF395Q9H8N7 513 aaPredicted RBP11.42□□□□□ -0.58
LINC00643-202ENST00000553426 ANKZF1Q9H8Y5 726 aa11.42□□□□□ -0.58
LINC00643-202ENST00000553426 SIRT3Q9NTG7 399 aaPredicted RBP11.42□□□□□ -0.58
LINC00643-202ENST00000553426 GPC6Q9Y625 555 aaPredicted RBP11.42□□□□□ -0.58
LINC00643-202ENST00000553426 A0A0J9YW62 118 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 DUXAA6NLW8 204 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 C6orf47O95873 294 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 BPGMP07738 259 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 INHBBP09529 407 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 LINGO3P0C6S8 592 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 PSMA4P25789 261 aaKnown RBP11.41□□□□□ -0.58
LINC00643-202ENST00000553426 ATP12AP54707 1039 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 SUMO3P55854 103 aaPredicted RBP11.41□□□□□ -0.58
LINC00643-202ENST00000553426 ZNF117Q03924 483 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 RNPS1Q15287 305 aaKnown RBP11.41□□□□□ -0.58
LINC00643-202ENST00000553426 CD226Q15762 336 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 CTU2Q2VPK5 515 aaKnown RBP11.41□□□□□ -0.58
LINC00643-202ENST00000553426 Q5PR19 223 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 EXOSC6Q5RKV6 272 aaKnown RBP11.41□□□□□ -0.58
LINC00643-202ENST00000553426 EMBQ6PCB8 327 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 NUDCD3Q8IVD9 361 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 KRTCAP2Q8N6L1 136 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 CPNE4Q96A23 557 aaPredicted RBP11.41□□□□□ -0.58
LINC00643-202ENST00000553426 COQ8BQ96D53 544 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 DUSP26Q9BV47 211 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 GSX1Q9H4S2 264 aaPredicted RBP11.41□□□□□ -0.58
LINC00643-202ENST00000553426 CXorf36Q9H7Y0 433 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 GIMAP2Q9UG22 337 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 ZDHHC2Q9UIJ5 367 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 PCDHGB4Q9UN71 923 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 ACTL7BQ9Y614 415 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 PCNX3Q9H6A9 2034 aa11.41□□□□□ -0.58
LINC00643-202ENST00000553426 ZNF195O14628 629 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 SIAH2O43255 324 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 AK1P00568 194 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 SLC7A1P30825 629 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 SOAT1P35610 550 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 CCR4P51679 360 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 NR1H2P55055 460 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 VSNL1P62760 191 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 FOXF1Q12946 379 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 SMU1Q2TAY7 513 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 PGS1Q32NB8 556 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 KLHL26Q53HC5 615 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 PLEKHM3Q6ZWE6 761 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 CXorf67Q86X51 503 aaPredicted RBP11.4□□□□□ -0.58
LINC00643-202ENST00000553426 TMCO5AQ8N6Q1 288 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 TOR1AIP2Q8NFQ8 470 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 FBXO27Q8NI29 283 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 POC1BQ8TC44 478 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 MRGPRX4Q96LA9 322 aa11.4□□□□□ -0.58
LINC00643-202ENST00000553426 C3orf30Q96M34 536 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms