RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 EXT1Q16394 746 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 MAPK14Q16539 360 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 KLHL26Q53HC5 615 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 PGBD2Q6P3X8 592 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 PODNL1Q6PEZ8 512 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 FAM198BQ6UWH4 519 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 C6orf15Q6UXA7 325 aaPredicted RBP11.59□□□□□ -0.55
CACNB3-217ENST00000550483 LANCL3Q6ZV70 420 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 OLIG3Q7RTU3 272 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 GALNT5Q7Z7M9 940 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 COMTD1Q86VU5 262 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 C9orf40Q8IXQ3 194 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 SLC43A2Q8N370 569 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 ZNF786Q8N393 782 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 SLC15A4Q8N697 577 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 NFAM1Q8NET5 270 aaPredicted RBP11.59□□□□□ -0.55
CACNB3-217ENST00000550483 OR4N2Q8NGD1 307 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 OR4K5Q8NGD3 323 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 FBLIM1Q8WUP2 373 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 ZNF566Q969W8 418 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 GAL3ST4Q96RP7 486 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 TEX12Q9BXU0 123 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 MAN2C1Q9NTJ4 1040 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 DNAJB12Q9NXW2 375 aaKnown RBP11.59□□□□□ -0.55
CACNB3-217ENST00000550483 NDUFA13Q9P0J0 144 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 RHCGQ9UBD6 479 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 KCNE5Q9UJ90 142 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 PADI1Q9ULC6 663 aa11.59□□□□□ -0.55
CACNB3-217ENST00000550483 OR6C70A6NIJ9 312 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 CPSF4LA6NMK7 179 aaKnown RBP11.58□□□□□ -0.56
CACNB3-217ENST00000550483 CHP2O43745 196 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 EIF4E2O60573 245 aaKnown RBP11.58□□□□□ -0.56
CACNB3-217ENST00000550483 ZFAND5O76080 213 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 STK17BO94768 372 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 DLGAP3O95886 979 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 IGKV1D-16P01601 117 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 GNAO1P09471 354 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 GGT2P36268 569 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 FOLR3P41439 243 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 EFNA3P52797 238 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 COPZ1P61923 177 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 RPP38P78345 283 aaKnown RBP11.58□□□□□ -0.56
CACNB3-217ENST00000550483 LAPTM4AQ15012 233 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 TRIP6Q15654 476 aaKnown RBP11.58□□□□□ -0.56
CACNB3-217ENST00000550483 RPL13AP3Q6NVV1 102 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 ZNF730Q6ZMV8 503 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 MBOAT2Q6ZWT7 520 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 GDF7Q7Z4P5 450 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 SLCO6A1Q86UG4 719 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 DND1Q8IYX4 353 aaKnown RBP11.58□□□□□ -0.56
CACNB3-217ENST00000550483 CDK20Q8IZL9 346 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 ESX1Q8N693 406 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 CLDN22Q8N7P3 220 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 ZNF614Q8N883 585 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 KDF1Q8NAX2 398 aaPredicted RBP11.58□□□□□ -0.56
CACNB3-217ENST00000550483 ZSCAN1Q8NBB4 408 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 APCDD1LQ8NCL9 501 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 FAM71CQ8NEG0 241 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 OR9Q2Q8NGE9 314 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 SLC22A8Q8TCC7 542 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 DNAJA4Q8WW22 397 aaPredicted RBP11.58□□□□□ -0.56
CACNB3-217ENST00000550483 TRUB1Q8WWH5 349 aaKnown RBP11.58□□□□□ -0.56
CACNB3-217ENST00000550483 NIPSNAP1Q9BPW8 284 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 C12orf10Q9HB07 376 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 VCX3AQ9NNX9 186 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 CCNB1IP1Q9NPC3 277 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 RLIMQ9NVW2 624 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 FBXO34Q9NWN3 711 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 RPS6KB2Q9UBS0 482 aa11.58□□□□□ -0.56
CACNB3-217ENST00000550483 A0A087WUU8 490 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 C21orf140B9A014 251 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 ALG1L2C9J202 215 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 TSPAN2O60636 221 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 MITFO75030 526 aaPredicted RBP11.57□□□□□ -0.56
CACNB3-217ENST00000550483 REM1O75628 298 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 UTS2O95399 124 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 CLPTM1O96005 669 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 IGF2P01344 180 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 GASTP01350 101 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 UBL4AP11441 157 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 ICAM2P13598 275 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 ZNF28P17035 718 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 FPR3P25089 353 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 CD82P27701 267 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 STAT5AP42229 794 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 RPL5P46777 297 aaKnown RBP11.57□□□□□ -0.56
CACNB3-217ENST00000550483 HLCSP50747 726 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 NR0B1P51843 470 aaKnown RBP11.57□□□□□ -0.56
CACNB3-217ENST00000550483 CRISP1P54107 249 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 NR1H2P55055 460 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 SLC26A5P58743 744 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 ISL1P61371 349 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 IL5RAQ01344 420 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 FOXC1Q12948 553 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 TSPAN31Q12999 210 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 TARDBPQ13148 414 aaKnown RBP eCLIP11.57□□□□□ -0.56
CACNB3-217ENST00000550483 APOFQ13790 326 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 OR1Q1Q15612 314 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 ULK3Q6PHR2 472 aa11.57□□□□□ -0.56
CACNB3-217ENST00000550483 KLHL17Q6TDP4 642 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms