RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 GTPBP1O00178 669 aaKnown RBP9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 TM9SF1O15321 606 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 RGS16O15492 202 aaPredicted RBP9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 GMFGO60234 142 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 EIF4E2O60573 245 aaKnown RBP9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 SS18L1O75177 396 aaPredicted RBP9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 AQP8O94778 261 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 AGR2O95994 175 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 SERPINE1P05121 402 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 MYZAPP0CAP1 466 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 CRYGSP22914 178 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 PSMA4P25789 261 aaKnown RBP9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 ETV4P43268 484 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 P2RX1P51575 399 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 ATP12AP54707 1039 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 ADAM8P78325 824 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 RNPS1Q15287 305 aaKnown RBP9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 KLHL26Q53HC5 615 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 DCST2Q5T1A1 773 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 HBMQ6B0K9 141 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 PPP4R4Q6NUP7 873 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZCCHC23Q6ZST2 131 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 RIMKLAQ8IXN7 391 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 LILRA2Q8N149 483 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 GATSQ8NAP1 163 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 FBXO30Q8TB52 745 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 PHOSPHO1Q8TCT1 267 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 OSTF1Q92882 214 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 CDS1Q92903 461 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 CPNE4Q96A23 557 aaPredicted RBP9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 ADGRG7Q96K78 797 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 RNF145Q96MT1 663 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 USB1Q9BQ65 265 aaKnown RBP9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 TACO1Q9BSH4 297 aaKnown RBP9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 C1orf50Q9BV19 199 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 HDHD5Q9BXW7 423 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 GPATCH2Q9NW75 528 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 KLHL28Q9NXS3 571 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 DTNAQ9Y4J8 743 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZFHX3Q15911 3703 aa9.76□□□□□ -0.85
VTI1BP3-201ENST00000550220 RNASET2O00584 256 aaKnown RBP9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 SKAP2O75563 359 aaPredicted RBP9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 NUDT14O95848 222 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 C6orf47O95873 294 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 GUSBP08236 651 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 LINGO3P0C6S8 592 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 G6PDP11413 515 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 CD53P19397 219 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 NR1H2P55055 460 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 POU4F3Q15319 338 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 CTU2Q2VPK5 515 aaKnown RBP9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 KRTAP21-3Q3LHN1 58 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 KRT71Q3SY84 523 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 TMEM201Q5SNT2 666 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 CCNJQ5T5M9 372 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 ANXA8L1Q5VT79 327 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 C20orf204Q6ZNR8 217 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 GALNT10Q86SR1 603 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 LRRC75A-AS1Q8N1F1 130 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 SLC43A2Q8N370 569 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 TOR1AIP2Q8NFQ8 470 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 SH3YL1Q96HL8 342 aaPredicted RBP9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 MRGPRX4Q96LA9 322 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 C3orf30Q96M34 536 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 KLHL15Q96M94 604 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 KLHL4Q9C0H6 718 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 NMUR2Q9GZQ4 415 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 CXorf36Q9H7Y0 433 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 EXD2Q9NVH0 621 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 FBXO34Q9NWN3 711 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 ICAM5Q9UMF0 924 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 GPR52Q9Y2T5 361 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 RAP2CQ9Y3L5 183 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 SETD2Q9BYW2 2564 aaPredicted RBP9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 CELSR1Q9NYQ6 3014 aa9.75□□□□□ -0.85
VTI1BP3-201ENST00000550220 A0A0J9YW62 118 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 FAM171A2A8MVW0 826 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 DEFB108AA8MXU0 73 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 SHISA8B8ZZ34 492 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZNF195O14628 629 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 TNFSF11O14788 317 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZNF264O43296 627 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 CXCL13O43927 109 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 SMPD2O60906 423 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 TMCC2O75069 709 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 EFNA1P20827 205 aaPredicted RBP9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 MATN1P21941 496 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 FKBP2P26885 142 aaKnown RBP9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 HOXC12P31275 282 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 RPL14P50914 215 aaKnown RBP9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 ABCE1P61221 599 aaKnown RBP9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 NKX6-1P78426 367 aaPredicted RBP9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 ZNF117Q03924 483 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 FOXD4Q12950 439 aaPredicted RBP9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 CBFBQ13951 182 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 CD226Q15762 336 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 DPY19L1Q2PZI1 675 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 PGS1Q32NB8 556 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 BEX5Q5H9J7 111 aa9.74□□□□□ -0.85
VTI1BP3-201ENST00000550220 PRSS57Q6UWY2 283 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms