RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 COLGALT1Q8NBJ5 622 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 OR5D13Q8NGL4 314 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 RAET1EQ8TD07 263 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 PDCD6IPQ8WUM4 868 aaKnown RBP4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 SPRYD4Q8WW59 207 aaPredicted RBP4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 CMTM5Q96DZ9 223 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 APOLD1Q96LR9 279 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 CASD1Q96PB1 797 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 TRNT1Q96Q11 434 aaKnown RBP4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 TSC22D3Q99576 134 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 UQCC2Q9BRT2 126 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 TRIM62Q9BVG3 475 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 SF3B5Q9BWJ5 86 aaKnown RBP4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 SLC26A1Q9H2B4 701 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 ESRP2Q9H6T0 727 aaKnown RBP4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 AAMDCQ9H7C9 122 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 TREM1Q9NP99 234 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 TAS2R1Q9NYW7 299 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 CISD1Q9NZ45 108 aaKnown RBP4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 RCC2Q9P258 522 aaKnown RBP4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 RCOR3Q9P2K3 495 aaPredicted RBP4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 SLC17A7Q9P2U7 560 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 ZNF490Q9ULM2 529 aaPredicted RBP4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 HEY1Q9Y5J3 304 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 MAD1L1Q9Y6D9 718 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 WDR81Q562E7 1941 aa4.56□□□□□ -1.68
ATP2B1-206ENST00000549727 TRAV6A0A075B6T7 132 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 GOLGA8QA0A0J9YX86 632 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 FAM159BA6NKW6 160 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 IFITM10A6NMD0 228 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 F8VVB4 439 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 F8VWA3 439 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 F8W810 466 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 M0R296 226 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 LSM1O15116 133 aaKnown RBP4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 SMIM24O75264 130 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 BANF1O75531 89 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 DDNO94850 711 aaPredicted RBP4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 EDN1P05305 212 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 CHRNGP07510 517 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 IGFBP1P08833 259 aaPredicted RBP4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 CD48P09326 243 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 ZCCHC18P0CG32 403 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 STAG3L2P0CL84 134 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 CXCL8P10145 99 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 GP9P14770 177 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 SRMP19623 302 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 CSTF2P33240 577 aaKnown RBP eCLIP4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 GLIPR1P48060 266 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 TNFSF10P50591 281 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 NDST1P52848 882 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 AQP5P55064 265 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 RPL26P61254 145 aaKnown RBP4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 OSTNP61366 133 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 MRPS15P82914 257 aaKnown RBP4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 MAT1AQ00266 395 aaKnown RBP4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 RASGEF1BQ0VAM2 473 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 ASPHQ12797 758 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 MERTKQ12866 999 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 NME3Q13232 169 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 TRIP10Q15642 601 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 CHI3L2Q15782 390 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 USF2Q15853 346 aaPredicted RBP4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 RBBP7Q16576 425 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 CCDC153Q494R4 210 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 AGKQ53H12 422 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 EFHC1Q5JVL4 640 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 PIK3CD-AS1Q5SR53 167 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 METTL21CQ5VZV1 264 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 PLCXD3Q63HM9 321 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 HIST2H2AA3Q6FI13 130 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 ANKRD54Q6NXT1 300 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 EIF3MQ7L2H7 374 aaKnown RBP4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 STRADAQ7RTN6 431 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 TMPRSS11BQ86T26 416 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 SLC25A41Q8N5S1 370 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 LRRC52Q8N7C0 313 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 KCNG3Q8TAE7 436 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 UBA3Q8TBC4 463 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 FAM172AQ8WUF8 416 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 TFB1MQ8WVM0 346 aaKnown RBP4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 SSMEM1Q8WWF3 244 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 MCHR2Q969V1 340 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 SGK3Q96BR1 496 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 ZNF333Q96JL9 665 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 SERAC1Q96JX3 654 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 TSNARE1Q96NA8 513 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 OR1F2PQ96R84 312 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 KLF6Q99612 283 aaPredicted RBP4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 ZNF184Q99676 751 aaPredicted RBP4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 SH3GL3Q99963 347 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 OMDQ99983 421 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 RTP3Q9BQQ7 232 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 ELOVL4Q9GZR5 314 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 GEMIN7Q9H840 131 aaKnown RBP4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 POPDC2Q9HBU9 364 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 CYSLTR2Q9NS75 346 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 NDE1Q9NXR1 346 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 SLC2A8Q9NY64 477 aa4.55□□□□□ -1.68
ATP2B1-206ENST00000549727 PKD2L2Q9NZM6 624 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms