RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GDF7Q7Z4P5 450 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 BMP8AQ7Z5Y6 402 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 MS4A15Q8N5U1 240 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 OR13C5Q8NGS8 318 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 OR51Q1Q8NH59 317 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 OR7D2Q96RA2 312 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 C1QTNF6Q9BXI9 259 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 SCP2D1Q9UJQ7 156 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 CHD7Q9P2D1 2997 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 ZIC2O95409 532 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-228ENST00000548938 WNT1P04628 370 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 MRPL3P09001 348 aaKnown RBP12.78□□□□□ -0.36
HDAC7-228ENST00000548938 SNRPBP14678 240 aaKnown RBP12.78□□□□□ -0.36
HDAC7-228ENST00000548938 NAGAP17050 411 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 ACVR1BP36896 505 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 ERVFC1P60507 584 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 ZSWIM7Q19AV6 140 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 FAM46CQ5VWP2 391 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 BHLHB9Q6PI77 547 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 ADCK2Q7Z695 626 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 SYT9Q86SS6 491 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 GJD3Q8N144 294 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 FTMTQ8N4E7 242 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 ZNF527Q8NB42 609 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 SMAP2Q8WU79 429 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-228ENST00000548938 TFGQ92734 400 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-228ENST00000548938 NUS1Q96E22 293 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 CNRIP1Q96F85 164 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-228ENST00000548938 AHCYL2Q96HN2 611 aaKnown RBP12.78□□□□□ -0.36
HDAC7-228ENST00000548938 MCHR1Q99705 422 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 METTL17Q9H7H0 456 aaPredicted RBP12.78□□□□□ -0.36
HDAC7-228ENST00000548938 NKIRAS2Q9NYR9 191 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 ZMIZ1Q9ULJ6 1067 aa12.78□□□□□ -0.36
HDAC7-228ENST00000548938 PPIEQ9UNP9 301 aaKnown RBP12.78□□□□□ -0.36
HDAC7-228ENST00000548938 SLC9A3R1O14745 358 aaPredicted RBP12.77□□□□□ -0.36
HDAC7-228ENST00000548938 HMGN1P05114 100 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 C8AP07357 584 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 CCR2P41597 374 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 ANXA11P50995 505 aaKnown RBP12.77□□□□□ -0.36
HDAC7-228ENST00000548938 RAB14P61106 215 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 LY6G5CQ5SRR4 150 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 TMEM64Q6YI46 380 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 MBOAT2Q6ZWT7 520 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 BTN2A1Q7KYR7 527 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 FGD2Q7Z6J4 655 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 LRRTM4Q86VH4 590 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 GID4Q8IVV7 300 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 ABHD4Q8TB40 342 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 IRF7Q92985 503 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 KISS1RQ969F8 398 aaPredicted RBP12.77□□□□□ -0.36
HDAC7-228ENST00000548938 SLC41A3Q96GZ6 507 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 SPRTNQ9H040 489 aaPredicted RBP12.77□□□□□ -0.36
HDAC7-228ENST00000548938 KLHL31Q9H511 634 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 AUNIPQ9H7T9 357 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 C12orf4Q9NQ89 552 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 COPZ2Q9P299 210 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 FBXO9Q9UK97 447 aaPredicted RBP12.77□□□□□ -0.36
HDAC7-228ENST00000548938 IRAK3Q9Y616 596 aa12.77□□□□□ -0.36
HDAC7-228ENST00000548938 A0A1W2PPL8 197 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 C4orf51C9J302 202 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 TSPAN4O14817 238 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 FCMRO60667 390 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 UBL3O95164 117 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 LRG1P02750 347 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 PEPDP12955 493 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 CTRB1P17538 263 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 TGM3Q08188 693 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 SUZ12Q15022 739 aaKnown RBP12.77□□□□□ -0.37
HDAC7-228ENST00000548938 TMEM240Q5SV17 173 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 CTRB2Q6GPI1 263 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 MEPCEQ7L2J0 689 aaKnown RBP12.77□□□□□ -0.37
HDAC7-228ENST00000548938 NLRC3Q7RTR2 1065 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 PRSS45Q7RTY3 260 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 PRSS42Q7Z5A4 293 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 KCTD20Q7Z5Y7 419 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 GPAT4Q86UL3 456 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 ADGRG3Q86Y34 549 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 IZUMO1Q8IYV9 350 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 RPLP0P6Q8NHW5 317 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 RBPMSQ93062 196 aaKnown RBP12.77□□□□□ -0.37
HDAC7-228ENST00000548938 LINC00615Q96LM1 132 aaPredicted RBP12.77□□□□□ -0.37
HDAC7-228ENST00000548938 ORAI3Q9BRQ5 295 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 ENKD1Q9H0I2 346 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 TMEM168Q9H0V1 697 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 ANKRD19PQ9H560 264 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 RDH8Q9NYR8 311 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 ADAM29Q9UKF5 820 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 MAB21L2Q9Y586 359 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 LRRK1Q38SD2 2015 aa12.77□□□□□ -0.37
HDAC7-228ENST00000548938 C17orf113A0A1B0GUU1 675 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 A0A1W2PPK0 400 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 HIDE1A8MVS5 230 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 M0R233 179 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 ADH1AP07327 375 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 ERGP11308 486 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 ATF1P18846 271 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 EN2P19622 333 aaPredicted RBP12.76□□□□□ -0.37
HDAC7-228ENST00000548938 MC3RP41968 323 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 MMP15P51511 669 aa12.76□□□□□ -0.37
HDAC7-228ENST00000548938 FXYD6P3P58550 94 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms