RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 MICAQ29983 383 aa18.37■□□□□ 0.53
CTDSP2-204ENST00000548823 PRICKLE4Q2TBC4 344 aa18.37■□□□□ 0.53
CTDSP2-204ENST00000548823 AP1ARQ63HQ0 302 aa18.37■□□□□ 0.53
CTDSP2-204ENST00000548823 TSPAN14Q8NG11 270 aa18.37■□□□□ 0.53
CTDSP2-204ENST00000548823 CTHRC1Q96CG8 243 aa18.37■□□□□ 0.53
CTDSP2-204ENST00000548823 THOC3Q96J01 351 aaKnown RBP18.37■□□□□ 0.53
CTDSP2-204ENST00000548823 MUS81Q96NY9 551 aa18.37■□□□□ 0.53
CTDSP2-204ENST00000548823 SPRTNQ9H040 489 aaPredicted RBP18.37■□□□□ 0.53
CTDSP2-204ENST00000548823 TRIM45Q9H8W5 580 aaPredicted RBP18.37■□□□□ 0.53
CTDSP2-204ENST00000548823 ACER3Q9NUN7 267 aa18.37■□□□□ 0.53
CTDSP2-204ENST00000548823 DHCR7Q9UBM7 475 aaKnown RBP18.37■□□□□ 0.53
CTDSP2-204ENST00000548823 ACAD8Q9UKU7 415 aa18.37■□□□□ 0.53
CTDSP2-204ENST00000548823 CTNSO60931 367 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 TFAP2AP05549 437 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 CTSBP07858 339 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 TNFRSF1BP20333 461 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 AVPR1BP47901 424 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 NR1H2P55055 460 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 SMIM11AP58511 58 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 SPIBQ01892 262 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 MGAT2Q10469 447 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 MAP4K2Q12851 820 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 ANKRD34AQ69YU3 496 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 FAM111BQ6SJ93 734 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 OR4N5Q8IXE1 308 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 SETD9Q8NE22 299 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 ADAMTS16Q8TE57 1224 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 HOXB13Q92826 284 aaPredicted RBP18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 PMM1Q92871 262 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 FKBP10Q96AY3 582 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 MVB12AQ96EY5 273 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 SLC35A4Q96G79 324 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 STACQ99469 402 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 RSPO3Q9BXY4 272 aaPredicted RBP18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 ENKD1Q9H0I2 346 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 SLC38A1Q9H2H9 487 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 PIGUQ9H490 435 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 SOX17Q9H6I2 414 aaPredicted RBP18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 MAT2BQ9NZL9 334 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 ABI3Q9P2A4 366 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 TESMINQ9Y4I5 508 aa18.36■□□□□ 0.53
CTDSP2-204ENST00000548823 A0A087WXM4 84 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 A0A0A6YYC8 382 aaPredicted RBP18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 TRAV17A0A0B4J275 112 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 SMIM31A0A1B0GVY4 71 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 I3L1I5 382 aaPredicted RBP18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 LDB3O75112 727 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 MED26O95402 600 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 LGI1O95970 557 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 PABPC4LP0CB38 370 aaKnown RBP18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 PTGER1P34995 402 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 ARG2P78540 354 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 CDSNQ15517 529 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 ARHGAP11BQ3KRB8 267 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 LIN52Q52LA3 116 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 GPAT3Q53EU6 434 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 RBM48Q5RL73 367 aaKnown RBP18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 ZNF691Q5VV52 312 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 KIRREL2Q6UWL6 708 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 OFCC1Q8IZS5 231 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 ZNF786Q8N393 782 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 CDRT4Q8N9R6 151 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 ATG16L2Q8NAA4 619 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 ACBD4Q8NC06 268 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 CHDHQ8NE62 594 aaPredicted RBP18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 C7orf57Q8NEG2 295 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 FBLIM1Q8WUP2 373 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 YIPF4Q9BSR8 244 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 NDC1Q9BTX1 674 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 GABARAPL3Q9BY60 117 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 GRIP2Q9C0E4 1043 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 DUSP22Q9NRW4 184 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 KRT84Q9NSB2 600 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 KIF17Q9P2E2 1029 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 SLC9A8Q9Y2E8 581 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 HS3ST3B1Q9Y662 390 aa18.35■□□□□ 0.53
CTDSP2-204ENST00000548823 FAM227AF5H4B4 570 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 GADD45GO95257 159 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 CLIC3O95833 236 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 AK1P00568 194 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 CRYABP02511 175 aaKnown RBP18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 GUSBP08236 651 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 LINGO3P0C6S8 592 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 NT5EP21589 574 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 GALNSP34059 522 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 PIGAP37287 484 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 MAP3K8P41279 467 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 TNFSF10P50591 281 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 CDH12P55289 794 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 TOP3AQ13472 1001 aaPredicted RBP18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 YOD1Q5VVQ6 348 aaPredicted RBP18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 DHRS4L2Q6PKH6 230 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 C16orf62Q7Z3J2 963 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 OR10G2Q8NGC3 310 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 HDAC2Q92769 488 aaKnown RBP18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 PITX2Q99697 317 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 SLC22A11Q9NSA0 550 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 ENOPH1Q9UHY7 261 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 POFUT2Q9Y2G5 429 aa18.34■□□□□ 0.53
CTDSP2-204ENST00000548823 KCNE3Q9Y6H6 103 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms