RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 RNF122Q9H9V4 155 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ROPN1Q9HAT0 212 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 NEUROD4Q9HD90 331 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 SIRT3Q9NTG7 399 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 MED17Q9NVC6 651 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 MKS1Q9NXB0 559 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ELOVL5Q9NYP7 299 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ZNF226Q9NYT6 803 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 NTMQ9P121 344 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 LGALS13Q9UHV8 139 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ZDHHC2Q9UIJ5 367 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 FAF1Q9UNN5 650 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 PROCRQ9UNN8 238 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ZNF175Q9Y473 711 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 V9GYY5 206 aaPredicted RBP6.02□□□□□ -1.45
SCAF11-211ENST00000547950 F8P00451 2351 aa6.02□□□□□ -1.45
SCAF11-211ENST00000547950 ANKRD17O75179 2603 aaKnown RBP6.01□□□□□ -1.45
SCAF11-211ENST00000547950 DNAJC13O75165 2243 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 CACNA1CQ13936 2221 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 NPIPA5A0A0B4J1W7 369 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 NPIPA7E9PJI5 369 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 GTPBP1O00178 669 aaKnown RBP6.01□□□□□ -1.45
SCAF11-211ENST00000547950 TNFSF11O14788 317 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 CTIFO43310 598 aaKnown RBP6.01□□□□□ -1.45
SCAF11-211ENST00000547950 CXCL13O43927 109 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 LYPLA1O75608 230 aaPredicted RBP6.01□□□□□ -1.45
SCAF11-211ENST00000547950 GOSR1O95249 250 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 SYNGR4O95473 234 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 HSPA4LO95757 839 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 C6orf47O95873 294 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 NGFRP08138 427 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 NPIPA8P0DM63 369 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 CD8BP10966 210 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 CD53P19397 219 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 IL11P20809 199 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 PRPS1L1P21108 318 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 ME2P23368 584 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 RPL3P39023 403 aaKnown RBP6.01□□□□□ -1.45
SCAF11-211ENST00000547950 CARD18P57730 90 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 RAC1P63000 192 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 NKX6-1P78426 367 aaPredicted RBP6.01□□□□□ -1.45
SCAF11-211ENST00000547950 FGFBP1Q14512 234 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 MLC1Q15049 377 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 CD226Q15762 336 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.01□□□□□ -1.45
SCAF11-211ENST00000547950 PLPPR5Q32ZL2 321 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 LSM12Q3MHD2 195 aaKnown RBP6.01□□□□□ -1.45
SCAF11-211ENST00000547950 XP32Q5T750 250 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 HBMQ6B0K9 141 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 ALKBH2Q6NS38 261 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 CDC73Q6P1J9 531 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 MISPQ8IVT2 679 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 LILRA2Q8N149 483 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 CLEC4FQ8N1N0 589 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 GTPBP8Q8N3Z3 284 aaPredicted RBP6.01□□□□□ -1.45
SCAF11-211ENST00000547950 METTL25Q8N6Q8 603 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 ZNF614Q8N883 585 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 WFDC11Q8NEX6 87 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 OR10D3Q8NH80 312 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 OR5AK3PQ8NH89 298 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 OR2V1Q8NHB1 315 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 POC1BQ8TC44 478 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 ACTRT2Q8TDY3 377 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 ROBO4Q8WZ75 1007 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 OSTF1Q92882 214 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 ZBTB8AQ96BR9 441 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 COQ8BQ96D53 544 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 PKNOX2Q96KN3 472 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 ACTRT3Q9BYD9 372 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 GSX1Q9H4S2 264 aaPredicted RBP6.01□□□□□ -1.45
SCAF11-211ENST00000547950 CXorf36Q9H7Y0 433 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 HHATLQ9HCP6 504 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 PLSCR4Q9NRQ2 329 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 ATAD3AQ9NVI7 634 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 MCTS1Q9ULC4 181 aaKnown RBP6.01□□□□□ -1.45
SCAF11-211ENST00000547950 ZNF232Q9UNY5 417 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 CARD8Q9Y2G2 431 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 EMC9Q9Y3B6 208 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 TESMINQ9Y4I5 508 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 KCNE3Q9Y6H6 103 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 NINQ8N4C6 2090 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 CELSR1Q9NYQ6 3014 aa6.01□□□□□ -1.45
SCAF11-211ENST00000547950 EML6Q6ZMW3 1958 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 SETD2Q9BYW2 2564 aaPredicted RBP6□□□□□ -1.45
SCAF11-211ENST00000547950 NCKAP5O14513 1909 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 A0A0J9YW62 118 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 DEFB108AA8MXU0 73 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 H3BNH8 94 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 ZNF195O14628 629 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 ADAMDEC1O15204 470 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 RGS16O15492 202 aaPredicted RBP6□□□□□ -1.45
SCAF11-211ENST00000547950 ITM2AO43736 263 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 TYROBPO43914 113 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 CYP7B1O75881 506 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 NTN1O95631 604 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 LINGO3P0C6S8 592 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 FAM157BP0CG42 384 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 G6PDP11413 515 aa6□□□□□ -1.45
SCAF11-211ENST00000547950 FCGR2AP12318 317 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms