RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 SLCO4C1Q6ZQN7 724 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 RABEPKQ7Z6M1 372 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 OLIG1Q8TAK6 271 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 SYT5O00445 386 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 GPR75O95800 540 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF26P17031 533 aaPredicted RBP11.76□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF43P17038 809 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 PBX2P40425 430 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 FNTBP49356 437 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 DAPP51397 102 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 TLE3Q04726 772 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 ACVR1Q04771 509 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 RSU1Q15404 277 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 LRRC37A5PQ49AS3 106 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 TMEM244Q5VVB8 128 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 Q6ZSR6 202 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 LILRA2Q8N149 483 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 PARP16Q8N5Y8 322 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 OR2A12Q8NGT7 310 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 ZMYND19Q96E35 227 aaPredicted RBP11.76□□□□□ -0.53
COL4A6-209ENST00000545689 MSANTD3Q96H12 275 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 TSNAXQ99598 290 aaKnown RBP11.76□□□□□ -0.53
COL4A6-209ENST00000545689 HDAC8Q9BY41 377 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 RNF215Q9Y6U7 377 aa11.76□□□□□ -0.53
COL4A6-209ENST00000545689 A0A0G2JMP0 313 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 LATO43561 262 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 FCER2P06734 321 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 CD63P08962 238 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 IMPA1P29218 277 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 OR4M2Q8NGB6 313 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 OR52R1Q8NGF1 315 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 BRIX1Q8TDN6 353 aaKnown RBP11.75□□□□□ -0.53
COL4A6-209ENST00000545689 NANOS1Q8WY41 292 aaKnown RBP11.75□□□□□ -0.53
COL4A6-209ENST00000545689 INIPQ9NRY2 104 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 CBLCQ9ULV8 474 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 NHSQ6T4R5 1651 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 RAB40ALP0C0E4 278 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF91Q05481 1191 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 MELKQ14680 651 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 OR1Q1Q15612 314 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 XKR7Q5GH72 579 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 Q6ZSR9 355 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 CD300LFQ8TDQ1 290 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 GAB3Q8WWW8 586 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 RAB40AQ8WXH6 277 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 DIO2Q92813 273 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 UNKLQ9H9P5 680 aaKnown RBP11.75□□□□□ -0.53
COL4A6-209ENST00000545689 GOSR2O14653 212 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 B4GAT1O43505 415 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 RDH16O75452 317 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 F11P03951 625 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 FURINP09958 794 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 RAB3AP20336 220 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 KCNJ5P48544 419 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 YPEL5P62699 121 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 TNFRSF17Q02223 184 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 DUS1LQ6P1R4 473 aaKnown RBP11.75□□□□□ -0.53
COL4A6-209ENST00000545689 RPL22L1Q6P5R6 122 aaKnown RBP11.75□□□□□ -0.53
COL4A6-209ENST00000545689 SLC35F3Q8IY50 421 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 FN3KQ9H479 309 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 CCDC86Q9H6F5 360 aaKnown RBP11.75□□□□□ -0.53
COL4A6-209ENST00000545689 SLAMF8Q9P0V8 285 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 NAALAD2Q9Y3Q0 740 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 TOGARAM1Q9Y4F4 1720 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 OR52A4PA6NMU1 304 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 SLC5A2P31639 672 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 PSPHP78330 225 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 GK2Q14410 553 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-209ENST00000545689 NHSL2Q5HYW2 709 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 AGAP6Q5VW22 663 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 FAM205BPQ63HN1 556 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 C5orf46Q6UWT4 87 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 MCATQ8IVS2 390 aaKnown RBP11.75□□□□□ -0.53
COL4A6-209ENST00000545689 EGLN2Q96KS0 407 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 AGAP4Q96P64 663 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 SIAEQ9HAT2 523 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 TEX10Q9NXF1 929 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-209ENST00000545689 COL18A1P39060 1754 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 GJB3O75712 270 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 SLCO2B1O94956 709 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF16P17020 682 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-209ENST00000545689 PTH2RP49190 550 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 RAB38P57729 211 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 RPE65Q16518 533 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF578Q96N58 590 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-209ENST00000545689 UHRF1Q96T88 793 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-209ENST00000545689 OR51J1Q9H342 316 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 RGCCQ9H4X1 137 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 V9GY05 133 aa11.75□□□□□ -0.53
COL4A6-209ENST00000545689 ILKQ13418 452 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 UBE2NLQ5JXB2 153 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF595Q8IYB9 648 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 ELMOD2Q8IZ81 293 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 LKAAEAR1Q8TD35 194 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 DUS3LQ96G46 650 aaKnown RBP11.74□□□□□ -0.53
COL4A6-209ENST00000545689 MARCH5Q9NX47 278 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 SLC6A14Q9UN76 642 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 A3GALT2U3KPV4 340 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 UBFD1O14562 309 aaKnown RBP11.74□□□□□ -0.53
COL4A6-209ENST00000545689 SCG5P05408 212 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms