RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SPRR3Q9UBC9 169 aa6.7□□□□□ -1.34
CPSF7-224ENST00000544990 MARCOQ9UEW3 520 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-224ENST00000544990 DKKL1Q9UK85 242 aa6.7□□□□□ -1.34
CPSF7-224ENST00000544990 CAMK2AQ9UQM7 478 aa6.7□□□□□ -1.34
CPSF7-224ENST00000544990 SLC6A5Q9Y345 797 aa6.7□□□□□ -1.34
CPSF7-224ENST00000544990 USP9YO00507 2555 aaPredicted RBP6.7□□□□□ -1.34
CPSF7-224ENST00000544990 DOPEY1Q5JWR5 2465 aa6.7□□□□□ -1.34
CPSF7-224ENST00000544990 GOLGA8QA0A0J9YX86 632 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 GOLGA8OA6NCC3 632 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 E9PBE3 544 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 GOLGA8NF8WBI6 632 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 SCDO00767 359 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 HNRNPRO43390 633 aaKnown RBP6.69□□□□□ -1.34
CPSF7-224ENST00000544990 KCNK2O95069 426 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 CPSF4O95639 269 aaKnown RBP6.69□□□□□ -1.34
CPSF7-224ENST00000544990 ANGPTL1O95841 491 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 EPPINO95925 133 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 NGFRP08138 427 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 SNRPB2P08579 225 aaKnown RBP6.69□□□□□ -1.34
CPSF7-224ENST00000544990 IDO1P14902 403 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 H2AFXP16104 143 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-224ENST00000544990 BMP7P18075 431 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 TBXA2RP21731 343 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 MATN1P21941 496 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 EPHA3P29320 983 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 S100A3P33764 101 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 DCTP40126 519 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 ZFP36L2P47974 494 aaKnown RBP6.69□□□□□ -1.34
CPSF7-224ENST00000544990 GAS1P54826 345 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 PCBP3P57721 371 aaKnown RBP6.69□□□□□ -1.34
CPSF7-224ENST00000544990 HBA1P69905 142 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 LRRC74AQ0VAA2 488 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 STX5Q13190 355 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 RCAN2Q14206 197 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 GANABQ14697 944 aaKnown RBP6.69□□□□□ -1.34
CPSF7-224ENST00000544990 DUSP5Q16690 384 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.69□□□□□ -1.34
CPSF7-224ENST00000544990 GRAMD1BQ3KR37 738 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 TTMPQ5BVD1 217 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 HIST2H2BCQ6DN03 193 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 RTL6Q6ICC9 239 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 C6orf120Q7Z4R8 191 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 MARCH3Q86UD3 253 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 MISPQ8IVT2 679 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 ULK2Q8IYT8 1036 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 MARVELD2Q8N4S9 558 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 GLB1L3Q8NCI6 653 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-224ENST00000544990 OR4A15Q8NGL6 344 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 LILRB4Q8NHJ6 448 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 FBXO30Q8TB52 745 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 FAM110BQ8TC76 370 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 ACTRT2Q8TDY3 377 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 DUSP19Q8WTR2 217 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 C16orf58Q96GQ5 468 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 C7orf26Q96N11 449 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 SFXN2Q96NB2 322 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 ZBTB18Q99592 522 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 SH3GL2Q99962 352 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 UGT2B28Q9BY64 529 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 HOXD1Q9GZZ0 328 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 DSN1Q9H410 356 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 WDR55Q9H6Y2 383 aaPredicted RBP6.69□□□□□ -1.34
CPSF7-224ENST00000544990 UBQLN4Q9NRR5 601 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 AIG1Q9NVV5 245 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 FBXL2Q9UKC9 423 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 RNF6Q9Y252 685 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 FAM215AQ9Y5M1 114 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 CACNA1CQ13936 2221 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 SPTAN1Q13813 2472 aaKnown RBP6.69□□□□□ -1.34
CPSF7-224ENST00000544990 PCNX3Q9H6A9 2034 aa6.69□□□□□ -1.34
CPSF7-224ENST00000544990 RNF103-CHMP3A0A140T963 221 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 HSPB2A8KAH6 182 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 ALG1L2C9J202 215 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 H3BNH8 94 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 ANKRD28O15084 1053 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 UBDO15205 165 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 TGDSO95455 350 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 OXSR1O95747 527 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-224ENST00000544990 AGR2O95994 175 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 AK1P00568 194 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 IGKV1D-16P01601 117 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 ALDOCP09972 364 aaKnown RBP6.68□□□□□ -1.34
CPSF7-224ENST00000544990 GLI4P10075 376 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 PEPDP12955 493 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 CPN1P15169 458 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 HK1P19367 917 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 UQCRC2P22695 453 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 CHMP24386 653 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 TIMP3P35625 211 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 GYS2P54840 703 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 NME5P56597 212 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 WNT3P56703 355 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 UFM1P61960 85 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 HSPB2Q16082 182 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 GSTA3Q16772 222 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 FAM174BQ3ZCQ3 159 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 GLYR1Q49A26 553 aaPredicted RBP6.68□□□□□ -1.34
CPSF7-224ENST00000544990 FAM209AQ5JX71 171 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 SPANXN4Q5MJ08 99 aa6.68□□□□□ -1.34
CPSF7-224ENST00000544990 CCNJQ5T5M9 372 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms