RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 KRT36O76013 467 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 NADKO95544 446 aaPredicted RBP8.73□□□□□ -1.01
YBX3-215ENST00000544504 ATP6V1G2O95670 118 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 BAG2O95816 211 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 CSTAP01040 98 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 LDLRP01130 860 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 IGKV1D-16P01601 117 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 CYP4B1P13584 511 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 ANPEPP15144 967 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 RHCEP18577 417 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 GNLYP22749 145 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 ITGA3P26006 1051 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 ERFP50548 548 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 CRYBA2P53672 197 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 RGS8P57771 180 aaPredicted RBP8.73□□□□□ -1.01
YBX3-215ENST00000544504 EEF1A1P68104 462 aaKnown RBP8.73□□□□□ -1.01
YBX3-215ENST00000544504 CDC20Q12834 499 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 SNTA1Q13424 505 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 FGFBP1Q14512 234 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 NTRK2Q16620 822 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 KLHL26Q53HC5 615 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 ACER2Q5QJU3 275 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 PDZK1Q5T2W1 519 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 TMEM81Q6P7N7 255 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 MAMDC2Q7Z304 686 aaPredicted RBP8.73□□□□□ -1.01
YBX3-215ENST00000544504 RANBP3LQ86VV4 465 aaPredicted RBP8.73□□□□□ -1.01
YBX3-215ENST00000544504 VRK2Q86Y07 508 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 PQLC1Q8N2U9 271 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 ZNF614Q8N883 585 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 CATSPER1Q8NEC5 780 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 TOR1AIP2Q8NFQ8 470 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 SLCO4A1Q96BD0 722 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 VCX3BQ9H321 246 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 CDCP1Q9H5V8 836 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 FBXO34Q9NWN3 711 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 CNIH4Q9P003 139 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 STOML1Q9UBI4 398 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 DNAJB9Q9UBS3 223 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 TESQ9UGI8 421 aaKnown RBP8.73□□□□□ -1.01
YBX3-215ENST00000544504 SH3GLB1Q9Y371 365 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 ENPP4Q9Y6X5 453 aa8.73□□□□□ -1.01
YBX3-215ENST00000544504 PDZD2O15018 2839 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 ITPR3Q14573 2671 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 CDHR4A6H8M9 788 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 H0Y3Z8 333 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 H3BNX3 289 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 GTPBP1O00178 669 aaKnown RBP8.72□□□□□ -1.01
YBX3-215ENST00000544504 CLOCKO15516 846 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 NKX2-8O15522 239 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 NDUFB5O43674 189 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 EIF4E2O60573 245 aaKnown RBP8.72□□□□□ -1.01
YBX3-215ENST00000544504 ICOSLGO75144 302 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 UGT2B11O75310 529 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 SEMA7AO75326 666 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 OXSR1O95747 527 aaPredicted RBP8.72□□□□□ -1.01
YBX3-215ENST00000544504 CST1P01037 141 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 SEMG1P04279 462 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 UBL4AP11441 157 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 EVI2BP34910 448 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 SLC6A8P48029 635 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 HLCSP50747 726 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 ARHGDIAP52565 204 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 SLC34A1Q06495 639 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 C17orf67Q0P5P2 114 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 Q0VFX4 171 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 ATP6AP1Q15904 470 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 NRF1Q16656 503 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 ZNF791Q3KP31 576 aaPredicted RBP8.72□□□□□ -1.01
YBX3-215ENST00000544504 GRAMD1BQ3KR37 738 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 MRPL2Q5T653 305 aaKnown RBP8.72□□□□□ -1.01
YBX3-215ENST00000544504 AGAP7PQ5VUJ5 663 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 ZNF836Q6ZNA1 936 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 RTL4Q6ZR62 310 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 VTCN1Q7Z7D3 282 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 CARM1Q86X55 608 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 APLFQ8IW19 511 aaPredicted RBP8.72□□□□□ -1.01
YBX3-215ENST00000544504 PRR22Q8IZ63 422 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 GALNT16Q8N428 558 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 FAM86B1Q8N7N1 296 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 GPR32P1Q8NGA4 272 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 OR4C3Q8NH37 302 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 BRIX1Q8TDN6 353 aaKnown RBP8.72□□□□□ -1.01
YBX3-215ENST00000544504 ZG16BQ96DA0 208 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 CENPNQ96H22 339 aaPredicted RBP8.72□□□□□ -1.01
YBX3-215ENST00000544504 AGAP4Q96P64 663 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 ARHGDIGQ99819 225 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 ZNF559Q9BR84 538 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 OSBPL10Q9BXB5 764 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 TRIM2Q9C040 744 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 QRSL1Q9H0R6 528 aaKnown RBP8.72□□□□□ -1.01
YBX3-215ENST00000544504 METTL7AQ9H8H3 244 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 ZBTB20Q9HC78 741 aaPredicted RBP8.72□□□□□ -1.01
YBX3-215ENST00000544504 EXOSC3Q9NQT5 275 aaKnown RBP8.72□□□□□ -1.01
YBX3-215ENST00000544504 C8orf4Q9NR00 106 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 HPF1Q9NWY4 346 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 TP53TG5Q9Y2B4 290 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 AKAP9Q99996 3911 aa8.72□□□□□ -1.01
YBX3-215ENST00000544504 ANKRD33BA6NCL7 494 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 PRAMEF25A6NGN4 478 aa8.71□□□□□ -1.02
YBX3-215ENST00000544504 ARGFXA6NJG6 315 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms