RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PAPPAQ13219 1627 aa6.48□□□□□ -1.37
SRGAP1-206ENST00000543397 FLRT2O43155 660 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 NDUFB2O95178 105 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ZDHHC11BP0C7U3 371 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 CD79AP11912 226 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 BMP4P12644 408 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 CELP19835 753 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 CAPN3P20807 821 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 THBS2P35442 1172 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 HTR3AP46098 478 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 CCL11P51671 97 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 PRRX1P54821 245 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 PRPS1P60891 318 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 TBCEQ15813 527 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 C1orf53Q5VUE5 145 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 LEG1Q6P5S2 330 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 UTS2BQ765I0 119 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 OR5T2Q8NGG2 359 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 OR4K13Q8NH42 304 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC45A3Q96JT2 553 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 NUDT9Q9BW91 350 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 SDR39U1Q9NRG7 319 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 DHDHQ9UQ10 334 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 MYO10Q9HD67 2058 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 PYCR1P32322 319 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 RBM34P42696 430 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 POU3F4P49335 361 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 MELKQ14680 651 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 NTRK2Q16620 822 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 GXYLT1Q4G148 440 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 NKAPLQ5M9Q1 402 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 HACD2Q6Y1H2 254 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ZADH2Q8N4Q0 377 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 IFI44Q8TCB0 444 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 HOXB13Q92826 284 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ATOH8Q96SQ7 321 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 VCX2Q9H322 139 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 FN3KQ9H479 309 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 MBNL1Q9NR56 388 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC35D1Q9NTN3 355 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 PPP1R14DQ9NXH3 145 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ENPP4Q9Y6X5 453 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 LOC102723532A0A0G2JNH3 316 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 A0A1W2PPC4 97 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 PLATP00750 562 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 HOXB9P17482 250 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ENPP1P22413 925 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 APLNRP35414 380 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 HAAOP46952 286 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 DAP3P51398 398 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 CRISP1P54107 249 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 FOXA1P55317 472 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 SEMA3BQ13214 749 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 KCNAB2Q13303 367 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 BCL7AQ4VC05 210 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 SFT2D3Q587I9 215 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 WDR73Q6P4I2 378 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 PRR18Q8N4B5 295 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ASCC1Q8N9N2 400 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 LMNTD1Q8N9Z9 388 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 OR5D16Q8NGK9 328 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 CDS1Q92903 461 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 FAM46AQ96IP4 442 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 VNN3Q9NY84 501 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 WNT16Q9UBV4 365 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 KLHL21Q9UJP4 597 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ADAM29Q9UKF5 820 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 YBX2Q9Y2T7 364 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 VIRMAQ69YN4 1812 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM202A6NGA9 273 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 PHYHO14832 338 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC22A1O15245 554 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 GLAP06280 429 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 PTGER1P34995 402 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 CCR2P41597 374 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 NPRL3Q12980 569 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 SEC23BQ15437 767 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 OR7A5Q15622 319 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ATP6AP1Q15904 470 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ZNF829Q3KNS6 432 aaPredicted RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 GTDC1Q4AE62 458 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 TMEM196Q5HYL7 178 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 SLC18B1Q6NT16 456 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 VTCN1Q7Z7D3 282 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 DNAAF1Q8NEP3 725 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 ELP5Q8TE02 316 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 MUCL1Q96DR8 90 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 NEDD4LQ96PU5 975 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 OR4K3Q96R72 315 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 CNN2Q99439 309 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 LMF2Q9BU23 707 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 MKRN2Q9H000 416 aaKnown RBP6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 KIR3DX1Q9H7L2 352 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 IL21Q9HBE4 155 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 MUTYHQ9UIF7 546 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 RIMS3Q9UJD0 308 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 TBC1D24Q9ULP9 559 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 PCDHA9Q9Y5H5 950 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 RNF215Q9Y6U7 377 aa6.47□□□□□ -1.37
SRGAP1-206ENST00000543397 A0A1B0GX78 115 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms