RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	ACAP2	Q15057	778 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	NEDD8	Q15843	81 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	MPEG1	Q2M385	716 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	ZNF791	Q3KP31	576 aa	Predicted RBP	5.87	□□□□□ -1.47
CIT-213	ENST00000543324	EMC4	Q5J8M3	183 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	PAGE2B	Q5JRK9	111 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	LIPJ	Q5W064	366 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	MED27	Q6P2C8	311 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	DGAT2L6	Q6ZPD8	337 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	ARMC8	Q8IUR7	673 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	SULF2	Q8IWU5	870 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	C9orf40	Q8IXQ3	194 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	DDIAS	Q8IXT1	998 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	CYP4Z2P	Q8N1L4	340 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	TMEM132C	Q8N3T6	1108 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	RNF175	Q8N4F7	328 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	ZNF441	Q8N8Z8	693 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	FAM98A	Q8NCA5	519 aa	Known RBP	5.87	□□□□□ -1.47
CIT-213	ENST00000543324	FAM156A	Q8NDB6	213 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	PSD4	Q8NDX1	1056 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	SRFBP1	Q8NEF9	429 aa	Known RBP	5.87	□□□□□ -1.47
CIT-213	ENST00000543324	OR14A16	Q8NHC5	309 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	HUS1B	Q8NHY5	278 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	ANGPTL6	Q8NI99	470 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	NUBPL	Q8TB37	319 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	FAM57A	Q8TBR7	257 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	SLC2A12	Q8TD20	617 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	FAM222B	Q8WU58	562 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	RASSF5	Q8WWW0	418 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	PIGT	Q969N2	578 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	UBE2E3	Q969T4	207 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	ZNF566	Q969W8	418 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	PPWD1	Q96BP3	646 aa	Known RBP	5.87	□□□□□ -1.47
CIT-213	ENST00000543324	CMTM7	Q96FZ5	175 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	ZNF486	Q96H40	463 aa	Predicted RBP	5.87	□□□□□ -1.47
CIT-213	ENST00000543324	DACH2	Q96NX9	599 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	C1QTNF3	Q9BXJ4	246 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	DEFB126	Q9BYW3	111 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	OR2B2	Q9GZK3	357 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	ROGDI	Q9GZN7	287 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	5.87	□□□□□ -1.47
CIT-213	ENST00000543324	DDX31	Q9H8H2	851 aa	Known RBP	5.87	□□□□□ -1.47
CIT-213	ENST00000543324	TMEM45A	Q9NWC5	275 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	TMEM160	Q9NX00	188 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	OPTC	Q9UBM4	332 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	LPAR3	Q9UBY5	353 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	EIF3L	Q9Y262	564 aa	Known RBP	5.87	□□□□□ -1.47
CIT-213	ENST00000543324	YARS2	Q9Y2Z4	477 aa	Known RBP	5.87	□□□□□ -1.47
CIT-213	ENST00000543324	ACOT9	Q9Y305	439 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	TESMIN	Q9Y4I5	508 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	ASB4	Q9Y574	426 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	A3GALT2	U3KPV4	340 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	FREM1	Q5H8C1	2179 aa		5.87	□□□□□ -1.47
CIT-213	ENST00000543324	ROS1	P08922	2347 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	MPDZ	O75970	2070 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	RNF103-CHMP3	A0A140T963	221 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324		A0A1B0GVC2	190 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324		A0A1W2PPR1	153 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	SYCE1L	A8MT33	242 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324		A8MUA0	341 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	SUPT3H	B4E1H0	165 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	NPIPA5	E9PKD4	350 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	KLRC4-KLRK1	H3BQV0	150 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	FOXE1	O00358	373 aa	Predicted RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	OR7A17	O14581	309 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	EI24	O14681	340 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	UBD	O15205	165 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	ZNHIT1	O43257	154 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	DYRK3	O43781	588 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	TMPRSS11D	O60235	418 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	DLX3	O60479	287 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	LDB3	O75112	727 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	BCAS1	O75363	584 aa	Predicted RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	GMNN	O75496	209 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	EED	O75530	441 aa	Known RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	ZFAND5	O76080	213 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	SEMA3D	O95025	777 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	KRT6A	P02538	564 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	KRT6B	P04259	564 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	JUN	P05412	331 aa	Known RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	RPS17	P08708	135 aa	Known RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	ABO	P16442	354 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	EPB42	P16452	691 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	TCN1	P20061	433 aa	Predicted RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	IMPDH1	P20839	514 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	CRHBP	P24387	322 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	ATP5F1	P24539	256 aa	Predicted RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	ACVR2A	P27037	513 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	IL12A	P29459	219 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	GALNS	P34059	522 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	KRT6C	P48668	564 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	SSR4	P51571	173 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	ALDH3A2	P51648	485 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	SLC7A2	P52569	658 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	PPP5C	P53041	499 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	EEFSEC	P57772	596 aa	Known RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	RNF4	P78317	190 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	OC90	Q02509	493 aa	Predicted RBP	5.86	□□□□□ -1.47
CIT-213	ENST00000543324	CHRNE	Q04844	493 aa		5.86	□□□□□ -1.47
CIT-213	ENST00000543324	TGM3	Q08188	693 aa		5.86	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms