RNA–Protein interactions for RNA: ENST00000542791.1

MRPS35-205, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-205ENST00000542791 RIMKLAQ8IXN7 391 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 COX18Q8N8Q8 333 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 ZNF610Q8N9Z0 462 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 WFDC11Q8NEX6 87 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 OR10D3Q8NH80 312 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 POC1BQ8TC44 478 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 AENQ8WTP8 325 aaKnown RBP7□□□□□ -1.29
MRPS35-205ENST00000542791 OR5P2Q8WZ92 322 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 CAVIN3Q969G5 261 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 COQ8BQ96D53 544 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 OTUB1Q96FW1 271 aaPredicted RBP7□□□□□ -1.29
MRPS35-205ENST00000542791 POM121Q96HA1 1249 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 GMPPAQ96IJ6 420 aaPredicted RBP7□□□□□ -1.29
MRPS35-205ENST00000542791 MED18Q9BUE0 208 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 BTBD2Q9BX70 525 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 ROPN1BQ9BZX4 212 aaPredicted RBP7□□□□□ -1.29
MRPS35-205ENST00000542791 PIGUQ9H490 435 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 CXorf36Q9H7Y0 433 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 ROPN1Q9HAT0 212 aaPredicted RBP7□□□□□ -1.29
MRPS35-205ENST00000542791 ZCCHC3Q9NUD5 404 aaKnown RBP7□□□□□ -1.29
MRPS35-205ENST00000542791 GPATCH2Q9NW75 528 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 BEX4Q9NWD9 120 aaPredicted RBP7□□□□□ -1.29
MRPS35-205ENST00000542791 KLHL28Q9NXS3 571 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 STOML1Q9UBI4 398 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 ZDHHC2Q9UIJ5 367 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 PROCRQ9UNN8 238 aa7□□□□□ -1.29
MRPS35-205ENST00000542791 EIF3LQ9Y262 564 aaKnown RBP7□□□□□ -1.29
MRPS35-205ENST00000542791 NUP214P35658 2090 aaPredicted RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 NPIPB9F8W1W9 429 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 ETV2O00321 342 aaPredicted RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 SCDO00767 359 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 WIPF1O43516 503 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 GMFGO60234 142 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 DIAPH2O60879 1101 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 SS18L1O75177 396 aaPredicted RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 PEX11AO75192 247 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 SOX30O94993 753 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 SLU7O95391 586 aaKnown RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 BPGMP07738 259 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 CREB1P16220 341 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 PRPS1L1P21108 318 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 LOXP28300 417 aaPredicted RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 ELK4P28324 431 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 EIF1P41567 113 aaKnown RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 CCT3P49368 545 aaKnown RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 PRIM2P49643 509 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 ZNF41P51814 821 aaPredicted RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 WDR4P57081 412 aaKnown RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 ZNF117Q03924 483 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 IFFO1Q0D2I5 559 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 SGCBQ16585 318 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 ATP6AP1LQ52LC2 224 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 KLHL26Q53HC5 615 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 IL23RQ5VWK5 629 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 CDC73Q6P1J9 531 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 WDR93Q6P2C0 686 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 EMBQ6PCB8 327 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 ESPNLQ6ZVH7 1005 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 MTERF4Q7Z6M4 381 aaKnown RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 KRTCAP2Q8N6L1 136 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 NATD1Q8N6N6 113 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 GATSQ8NAP1 163 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 FNDC5Q8NAU1 212 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 OR56A1Q8NGH5 318 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 OR6K3Q8NGY3 331 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 OR2V1Q8NHB1 315 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 B4GALNT2Q8NHY0 566 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 AGR3Q8TD06 166 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 SFXN5Q8TD22 340 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 NUDT8Q8WV74 236 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 JADE3Q92613 823 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 CDS1Q92903 461 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 SH3YL1Q96HL8 342 aaPredicted RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 RNF145Q96MT1 663 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 C1orf50Q9BV19 199 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 TMEM109Q9BVC6 243 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 ACTRT3Q9BYD9 372 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 NEUROD4Q9HD90 331 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 PLSCR4Q9NRQ2 329 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 GLRX2Q9NS18 164 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 ATAD3AQ9NVI7 634 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 PAQR5Q9NXK6 330 aaPredicted RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 ZNF226Q9NYT6 803 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 C6orf203Q9P0P8 240 aaPredicted RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 MCTS1Q9ULC4 181 aaKnown RBP6.99□□□□□ -1.29
MRPS35-205ENST00000542791 ICAM5Q9UMF0 924 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 EMC9Q9Y3B6 208 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 ACTL7BQ9Y614 415 aa6.99□□□□□ -1.29
MRPS35-205ENST00000542791 FBN1P35555 2871 aaKnown RBP6.98□□□□□ -1.29
MRPS35-205ENST00000542791 A0A0J9YW62 118 aa6.98□□□□□ -1.29
MRPS35-205ENST00000542791 TNFSF11O14788 317 aa6.98□□□□□ -1.29
MRPS35-205ENST00000542791 OIP5O43482 229 aa6.98□□□□□ -1.29
MRPS35-205ENST00000542791 CXCL13O43927 109 aa6.98□□□□□ -1.29
MRPS35-205ENST00000542791 SKAP2O75563 359 aaPredicted RBP6.98□□□□□ -1.29
MRPS35-205ENST00000542791 NTN1O95631 604 aa6.98□□□□□ -1.29
MRPS35-205ENST00000542791 C6orf47O95873 294 aa6.98□□□□□ -1.29
MRPS35-205ENST00000542791 THBDP07204 575 aa6.98□□□□□ -1.29
MRPS35-205ENST00000542791 KRT16P08779 473 aa6.98□□□□□ -1.29
MRPS35-205ENST00000542791 G6PDP11413 515 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms