RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 SSX6Q7RTT6 188 aa8.85□□□□□ -0.99
CNOT4-212ENST00000541284 C9orf62Q8N4C0 152 aa8.85□□□□□ -0.99
CNOT4-212ENST00000541284 OR7G1Q8NGA0 311 aa8.85□□□□□ -0.99
CNOT4-212ENST00000541284 SMAP2Q8WU79 429 aaPredicted RBP8.85□□□□□ -0.99
CNOT4-212ENST00000541284 RAB11FIP5Q9BXF6 653 aa8.85□□□□□ -0.99
CNOT4-212ENST00000541284 MEPEQ9NQ76 525 aaPredicted RBP8.85□□□□□ -0.99
CNOT4-212ENST00000541284 SIDT1Q9NXL6 827 aaKnown RBP8.85□□□□□ -0.99
CNOT4-212ENST00000541284 CLDND1Q9NY35 253 aa8.85□□□□□ -0.99
CNOT4-212ENST00000541284 C7orf66A4D0T2 115 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 SCAMP1O15126 338 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 CHST10O43529 356 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 NDUFS1P28331 727 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 BTN3A2P78410 334 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 C16orf62Q7Z3J2 963 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 OAFQ86UD1 273 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 PLCZ1Q86YW0 608 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 TOR1AIP2Q8NFQ8 470 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 CREB3L1Q96BA8 519 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 PEX11GQ96HA9 241 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 GHITMQ9H3K2 345 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 KIR3DX1Q9H7L2 352 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 MTHFD2LQ9H903 347 aaPredicted RBP8.84□□□□□ -0.99
CNOT4-212ENST00000541284 SLC28A3Q9HAS3 691 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 ADGRL4Q9HBW9 690 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 LYARQ9NX58 379 aaKnown RBP8.84□□□□□ -0.99
CNOT4-212ENST00000541284 EXTL2Q9UBQ6 330 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 FBXL4Q9UKA2 621 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 SCN2AQ99250 2005 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 A0A1W2PP55 124 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 UNC119BA6NIH7 251 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 BTN3A3O00478 584 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 CPNE3O75131 537 aaKnown RBP8.84□□□□□ -0.99
CNOT4-212ENST00000541284 PTP4A3O75365 173 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 THBS1P07996 1170 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 PRKAR1AP10644 381 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 CLUP10909 449 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 GJA4P35212 333 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 SLC25A35Q3KQZ1 300 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 TRMT12Q53H54 448 aaKnown RBP8.84□□□□□ -0.99
CNOT4-212ENST00000541284 PRPF38BQ5VTL8 546 aaKnown RBP8.84□□□□□ -0.99
CNOT4-212ENST00000541284 GARNL3Q5VVW2 1013 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 VITQ6UXI7 678 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 NANOGNBQ7Z5D8 188 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 GPR135Q8IZ08 494 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 ACBD7Q8N6N7 88 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 DTX3Q8N9I9 347 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 TMEM52Q8NDY8 209 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 GAL3ST3Q96A11 431 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 SCMH1Q96GD3 660 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 WACQ9BTA9 647 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 IL21RQ9HBE5 538 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 ZFP64Q9NPA5 681 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 ST6GALNAC2Q9UJ37 374 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 SIGLEC7Q9Y286 467 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 STON1Q9Y6Q2 735 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 A0A0A6YYJ9 748 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 TNFRSF10AO00220 468 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 PEX12O00623 359 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 CHP2O43745 196 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 CTSVO60911 334 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 PCDH8O95206 1070 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 GKN3PP0CG01 181 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 NPR2P20594 1047 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 WASP42768 502 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 BTG1P62324 171 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 MGAT2Q10469 447 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 CEP78Q5JTW2 689 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 LRRC28Q86X40 367 aaPredicted RBP8.84□□□□□ -0.99
CNOT4-212ENST00000541284 OR4N5Q8IXE1 308 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 LRRC25Q8N386 305 aaPredicted RBP8.84□□□□□ -0.99
CNOT4-212ENST00000541284 SLC37A3Q8NCC5 494 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 C19orf18Q8NEA5 215 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 ACOT12Q8WYK0 555 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 FGF13Q92913 245 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 SMARCD2Q92925 531 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 MS4A3Q96HJ5 214 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 PLA2G2FQ9BZM2 168 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 ERVMER34-1Q9H9K5 563 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 FGF22Q9HCT0 170 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 ENAMQ9NRM1 1142 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 CMC2Q9NRP2 79 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 NLGN3Q9NZ94 848 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 TRIOO75962 3097 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 CEP192Q8TEP8 1941 aa8.84□□□□□ -0.99
CNOT4-212ENST00000541284 TBC1D3KA0A087X1G2 549 aa8.83□□□□□ -1
CNOT4-212ENST00000541284 A0A1B0GVC2 190 aa8.83□□□□□ -1
CNOT4-212ENST00000541284 FAM240BA0A1B0GVZ2 78 aa8.83□□□□□ -1
CNOT4-212ENST00000541284 CDHR4A6H8M9 788 aa8.83□□□□□ -1
CNOT4-212ENST00000541284 TBC1D3BA6NDS4 549 aa8.83□□□□□ -1
CNOT4-212ENST00000541284 TBC1D3FA6NER0 549 aaPredicted RBP8.83□□□□□ -1
CNOT4-212ENST00000541284 A6NIN4 97 aa8.83□□□□□ -1
CNOT4-212ENST00000541284 HMGN1P05114 100 aa8.83□□□□□ -1
CNOT4-212ENST00000541284 NGFRP08138 427 aa8.83□□□□□ -1
CNOT4-212ENST00000541284 ADAM15Q13444 863 aa8.83□□□□□ -1
CNOT4-212ENST00000541284 TBC1D3GQ6DHY5 549 aa8.83□□□□□ -1
CNOT4-212ENST00000541284 DMKNQ6E0U4 476 aaPredicted RBP8.83□□□□□ -1
CNOT4-212ENST00000541284 TANGO2Q6ICL3 276 aa8.83□□□□□ -1
CNOT4-212ENST00000541284 MZT2BQ6NZ67 158 aa8.83□□□□□ -1
CNOT4-212ENST00000541284 SFXN4Q6P4A7 337 aa8.83□□□□□ -1
CNOT4-212ENST00000541284 TMPRSS11FQ6ZWK6 438 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms