RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 OR2T33Q8NG76 320 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR7G2Q8NG99 324 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR2A1Q8NGT9 310 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZCCHC10Q8TBK6 192 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 LRRC20Q8TCA0 184 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 GIMAP1Q8WWP7 306 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 PTP4A1Q93096 173 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 HYLS1Q96M11 299 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 PINK1Q9BXM7 581 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR51J1Q9H342 316 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 FN3KQ9H479 309 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 SLC6A20Q9NP91 592 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 ACSS1Q9NUB1 689 aaPredicted RBP9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 BABAM2Q9NXR7 383 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 AK6Q9Y3D8 172 aaKnown RBP9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 ASB4Q9Y574 426 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 INSL6Q9Y581 213 aa9.64□□□□□ -0.87
CDC42SE1-207ENST00000540998 SERPINI2O75830 405 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 RGS11O94810 467 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 IGHA1P01876 353 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 TCRBP04435 133 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ATF1P18846 271 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 PRKACBP22694 351 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 HTR2AP28223 471 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 GRPRP30550 384 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 TALDO1P37837 337 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZP1P60852 638 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ST3GAL3Q11203 375 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 EXOSC2Q13868 293 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF77Q15935 545 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 KIAA0907Q7Z7F0 614 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 DERL3Q96Q80 235 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 NKX3-1Q99801 234 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZBP1Q9H171 429 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 DPEP2Q9H4A9 486 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 IL20Q9NYY1 176 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF224Q9NZL3 707 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR6C2Q9NZP2 312 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 APOBEC3BQ9UH17 382 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF346Q9UL40 294 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 CNTRLQ7Z7A1 2325 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 CDHR4A6H8M9 788 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 SNTNA6NMZ2 147 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 IDSB3KWA1 339 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 LRRN3E7EW58 273 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 GMDSO60547 372 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 SOX30O94993 753 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 PCDH8O95206 1070 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 CXCL10P02778 98 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 SLC35G4P0C7Q5 338 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 EPCAMP16422 314 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 NDUFV2P19404 249 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 HIST1H1TP22492 207 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 STOMP27105 288 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 TEAD1P28347 426 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 NAA10P41227 235 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 BTN3A2P78410 334 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 HBMQ6B0K9 141 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 NIPAL3Q6P499 406 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF836Q6ZNA1 936 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF767PQ75MW2 155 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 KANSL1Q7Z3B3 1105 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 MRGPREQ86SM8 312 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ZNF614Q8N883 585 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 OR51Q1Q8NH59 317 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 FANK1Q8TC84 345 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 KISS1RQ969F8 398 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 RFKQ969G6 155 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 MS4A6EQ96DS6 147 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 CACNG6Q9BXT2 260 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 SLC25A18Q9H1K4 315 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 LRRN3Q9H3W5 708 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 NFKBIL1Q9UBC1 381 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 SERGEFQ9UGK8 458 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ENTPD4Q9Y227 616 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 C4orf47A7E2U8 309 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 SIGLEC5O15389 551 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 SSNA1O43805 119 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 PAK4O96013 591 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 PROS1P07225 676 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 POU3F2P20265 443 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ATP5A1P25705 553 aaKnown RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 PSMB10P40306 273 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 SIGLEC14Q08ET2 396 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 KIAA1211LQ6NV74 962 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 FIGNL1Q6PIW4 674 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 Q6ZTK2 550 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 GET4Q7L5D6 327 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 OAFQ86UD1 273 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 COMMD7Q86VX2 200 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 C12orf76Q8N812 135 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 GANCQ8TET4 914 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ACOT11Q8WXI4 607 aaPredicted RBP9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 YIPF5Q969M3 257 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 RELTQ969Z4 430 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ELP4Q96EB1 424 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 ARHGDIGQ99819 225 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 DHRS9Q9BPW9 319 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 PDCD1LG2Q9BQ51 273 aa9.63□□□□□ -0.87
CDC42SE1-207ENST00000540998 IFT27Q9BW83 186 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms